Etheostoma spectabile (orangethroat darter): 116705279
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Entry
116705279 CDS
T08457
Symbol
pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116705279 (pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116705279 (pnpt1)
03016 Transfer RNA biogenesis [BR:
esp03016
]
116705279 (pnpt1)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
116705279 (pnpt1)
Messenger RNA biogenesis [BR:
esp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
116705279 (pnpt1)
Transfer RNA biogenesis [BR:
esp03016
]
Prokaryotic type
tRNA degradation factors
116705279 (pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
116705279
NCBI-ProteinID:
XP_032397235
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All DBs
Position
17:6199765..6208891
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AA seq
768 aa
AA seq
DB search
MRYLLRLGHSFARLHVRLCHQSVYSNNTNARRLVVDLGEKKLEISSGRFARFADGSAVVK
LGDTSVMVTAVSRAKPSPSQFMPLVVDYRQKAAAAGRIPTNHLRRELGTTDNEILTSRLI
DRSIRPLFPPGYFYDTQILCNLLAVDGVNDPDVLAINAASAALALSDIPWHGPIGAVRVG
MVDGEMLINPTRAEMTSSSLNLIVAGAPCSQVVMIEASAENVLQQDFCHAVKVGVKHTQQ
IIQAIQQLAREQKVTKRTPVRVFSVPTDMVEHVRQLASKKIYAVFTDYTHDKISRDEAIN
KVRLETEEDLKDRFPQAEPFEVIESFNTVSKEVFRNLVLNEYKRCDGRELTALRNISCDV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESSIKADIITTALSGIKSKNFMLHYEFPPYAT
NEIGKMGGINRRELGHGALAEKALRPIIPKDFPFTIRVTAEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAVGLISKPNPDKPTEIQDYRLLTDILGIEDYLGDMDFKLAGTNKG
ITALQADVKIPGLPLKVVMEAIQQATVAKREILSIMNKCTAKPRETRKENGPVVENVRVP
VSKRARFVGPGGYNLRRLQVQTGVTISQVDEETFSVFAPTPGAMNEAQDFISDICKDDQE
QQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRIKHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATVVKTLSEKQSISMGSSDTTSTQL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttgctccgactggggcactcgtttgcccgccttcatgtccgtttatgtcac
cagagtgtttacagtaacaatacaaatgcgcgaagactggtagtggaccttggtgagaag
aaacttgagatctcttcagggaggttcgctagatttgctgatggatctgctgtagtaaag
ttgggagatacctccgtgatggtgactgctgtgagcagagccaaaccttctccatcccag
ttcatgcctcttgtggtggactacagacagaaagcagctgctgcaggtcgaatccccact
aaccatttgagacgagagctgggcaccactgataatgagatccttaccagcagactcata
gacaggtcgatcagaccactgttccctcctggttacttttatgatactcagatcctttgt
aacctgctggcagtagatggtgtcaatgatccagatgtgttggctattaatgcagcttcc
gcggctctggccctgtctgacatcccctggcatggacccataggtgctgtgcgagtgggc
atggtagatggagagatgctgatcaaccccactagggcagagatgacttccagcagtctt
aacctgattgtggctggagccccctgcagtcaagttgtgatgattgaggcgtcagctgag
aacgtgctgcagcaggacttttgccatgcagtgaaggtgggagtcaaacacacccagcag
atcatacaggccatccagcagctggcgcgagaacagaaggtcaccaagcgcacccccgtc
agggtcttctccgtcccgactgacatggtggagcatgttcgacaattagcttccaagaag
atctatgcagttttcactgattacactcacgataagatttcaagagatgaagctatcaac
aaagttcgactagaaactgaagaggacctaaaagaccgattccctcaggctgagcccttt
gaagtcattgagtcctttaacactgtgagcaaagaagtattccgcaatttagtgcttaat
gagtacaagagatgcgatgggagggagttgactgctttaagaaacatttcttgtgatgtc
gacctcttcaagccgctgcatggctcagctcttttccagagaggacaaacacaggtgctg
tgcagtgttacatttgattccttggaatccagtatcaaagcagatatcatcaccacagct
ttgagtggcatcaaatccaaaaatttcatgcttcattatgagttccctccatatgcaaca
aatgagattggaaagatgggaggcatcaacagaagagagcttggacacggggccctggct
gagaaagctctgagaccaattattcctaaagacttccctttcactatccgggtcactgct
gaggtgctggagtcaaacggatcatcctcaatggcttcagcatgtggaggcagccttgct
ctaatggatgcaggtgtgcccatctcctctgctgtggcaggtgtagcagttggcctcatc
tccaagcccaacccagacaaacctactgagatccaagactacagattactaactgatatc
ctgggaatagaggattacctcggagacatggacttcaaattggcaggaacaaacaagggc
atcactgctttacaggctgatgtgaagatcccaggtttgcctctgaaggtggtcatggag
gctatccaacaggccacagtggcaaagagggaaatcttgagcatcatgaacaaatgtaca
gcaaaaccaagagagacgaggaaagagaatggacctgttgttgaaaatgtccgggtgcct
gtttccaaacgagcgcgctttgttggtccagggggatataatcttcgcaggctacaagtt
caaacaggtgtgacaataagtcaggtggacgaggagactttctctgtgtttgctccaaca
ccaggagccatgaatgaagcccaagacttcatcagtgacatctgcaaagatgatcaagaa
caacagctagagtttggtgctatctacaccgccacgatcacggagataagggacattggt
gtgatggtgaagctttatcccaacatgagtgctgtcctgctgcacaactcacaactcgac
cacaaacggatcaaacatccaagtgctttgggtttagaggtgggacagcagatacaggtc
aagtactttggacgggacccaacagacggcagaatgagactttcaaggaaggtgctccag
tctcctgctgcaactgtcgtcaagacactaagtgagaaacagagcatctccatgggttca
agcgacaccaccagcacccaattgtga
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