Etheostoma spectabile (orangethroat darter): 116705290
Help
Entry
116705290 CDS
T08457
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116705290
Transcription factors [BR:
esp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116705290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_2
HLH
PAS_9
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
116705290
NCBI-ProteinID:
XP_032397252
LinkDB
All DBs
Position
17:18555129..18565804
Genome browser
AA seq
812 aa
AA seq
DB search
MSCAVLGGGGYKSKDATLLIQTRACRGGYIISVEMNIWCKSCKCPVSAPCASRRLADGQR
TSSCRRFRSTKGASKARRDHINHEIRNLRTLLPITQEDQERLSYLHSMAAICTYIRKSVL
FQGLPAGVRSHCSLPYEAFLQALHGFILVTTAQGRLVYVSENAAEYLGLSMIDVLQGDTF
YDMVERSDIDIVKSNLDIKKNSSSERSFICCMHTTKAFKLQHGSGCSMMVRGRFQSFLQP
CPSLSSACPTNQPLFVALCTPTVNRLQSSDSDFHHSFNSVHRLDMSFTQLSDSVLYFLGC
SAEEMTGRSWYGLVHPEDLSLSAVSHRSLMQADDGFQVEMVLRLQCKDLSWTWVYIRANK
NSECQSVSCVNFIISETEARFLQEKISSDAFRPSSLSLLNSCHFAGQQAPQAQSHNNTKC
FKRQRSSDSQSEEPGAKARRESEQDLYFVACVSSPGDSSPVPLGDSPALFTPPYSPASSS
SSLQQRELSHDLLMDVHGYTDQLLSSPECSPYYYSYPEAGLTCHQSPSDSLPAAAEQTFD
QAASPLSSSSSSSSSSSPTYDFQACSADARLVPDYRSVSDMCESPVDCALHQDDFSLPEQ
PQGGSRVQMHHVPHHVLPIHSSLLTPNQSPTSTESNHYNEREQAEISILAQQISSLASSF
AMYNTLSPLQNVAQPATTNTLASTSNWPHHPSLPSGSLLKREMVLDDGVFDSILKDLDAV
TRKSSMSGPGDVACSYQQGLLSCRSGPHQLEQEPLWLSPPITEDPLPAEQFTAMDPFSLQ
SGHYVQNTELHQLNHYMQSALQQDGLAEENLY
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgccgtgttggggggggggggctataaaagcaaggacgcgacactccttatc
cagaccagagcctgcagaggtggctacatcatcagcgtcgaaatgaacatttggtgcaaa
tcgtgcaaatgtcctgttagtgctccgtgcgcctctcgtcgtctggccgacggtcagcgc
acctcctcctgcaggaggttcagatccaccaaaggagcatccaaagctcgacgggatcac
atcaatcatgagatcaggaatttgcgcactctgttgcccatcacccaggaggaccaggag
cgtctctcctacctgcactccatggccgccatctgcacctacatcaggaagtctgttctc
ttccagggactcccagctggggtgagatcccactgctctctgccatacgaggcctttctt
caagcactgcacggcttcatcctggtcaccaccgcacaggggaggctggtctatgtgtcc
gaaaatgcagctgaatatctcggtctttccatgatagatgtgcttcaaggagacactttc
tatgacatggtggaacgctctgacattgatattgttaaatcaaacctggacattaaaaag
aactcatcatcagagaggagctttatatgttgtatgcacaccaccaaggccttcaagctg
caacacggcagcggctgttccatgatggtcagagggagattccagtctttccttcagcct
tgtccgtccttgtcttcagcctgtcccaccaaccagcctctgttcgtggccctctgcacc
cccacggtcaaccgcctgcagagctcggactctgacttccatcacagcttcaacagtgtc
cacagactcgacatgtccttcactcagctgtccgacagtgttttatattttttgggctgt
tcggcagaagagatgactggtcggtcgtggtatggtctcgtccaccctgaagatctttct
ttgagtgcggtttctcacagaagtttaatgcaggcagatgacggcttccaggtggagatg
gtgctcagactccagtgtaaggatctttcgtggacctgggtctacattcgagctaacaaa
aactcggagtgccagagcgtgagctgcgttaacttcatcatcagtgaaacagaggccaga
tttctgcaggagaaaatcagcagcgatgccttcaggccatcatctctatctctgttaaat
tcctgccattttgcgggtcaacaggcgccacaagctcagagccacaacaacactaaatgc
tttaaaagacagaggagttctgacagccaaagcgaggagccaggagccaaagctagacgg
gagtctgagcaagacttatactttgtggcgtgcgtgtcctccccaggcgatagctcacct
gttcccttgggtgacagccctgctctcttcacccctccctacagcccggcctcctccagc
tcctctctgcagcagcgggagctcagccatgacctcctgatggatgtgcatggatacaca
gatcagctgctgtcctcccctgagtgctctccctactattattcctacccagaggcaggg
ctcacctgtcaccaatcaccctccgactccctccctgcagctgctgaacaaacctttgac
caagcagcctctccactctcttcttcctcctcctcctcttcctcctcatctccgacctat
gatttccaagcttgttccgccgatgctcgattagttcctgactaccggtctgtgtcagac
atgtgtgagagccccgtggactgcgctctgcatcaagacgacttcagccttccagagcag
ccacaagggggcagccgtgtccaaatgcatcacgtcccccaccatgtgttgcccatacat
tccagccttcttacccccaaccaatctcccacatccacagagtctaaccattacaacgag
agggagcaggcggagatcagtattctggctcagcagatctcctccctggccagcagcttt
gccatgtacaataccctaagtccacttcaaaatgtggcccaacctgccaccactaacacc
ctggcctccaccagcaactggccccatcacccttctctcccctcgggctctctgcttaag
cgcgagatggtcctcgatgacggcgtgttcgacagcattctgaaggacctggacgcggtt
acaaggaaaagcagcatgtctggccccggtgatgtagcatgcagctaccagcagggcttg
ctgagctgcaggagtgggccccatcagctggagcaggagcccctctggctctccccgccc
atcacagaggacccgctgcctgcagagcagttcactgccatggatcccttcagtttgcag
tcgggacactatgtccaaaacactgagttgcatcaactcaaccactatatgcagagtgcc
cttcagcaagatggacttgctgaagaaaacctgtactga
DBGET
integrated database retrieval system
