Etheostoma spectabile (orangethroat darter): 116705354
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Entry
116705354 CDS
T08457
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116705354 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116705354 (polr1b)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116705354 (polr1b)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116705354 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
116705354
NCBI-ProteinID:
XP_032397370
LinkDB
All DBs
Position
17:18932116..18943478
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AA seq
1134 aa
AA seq
DB search
MNSSTKWNNLPKGPSLKNLTEGGFGVLKESQHAAVQDLTKAHIESFDQAVTDGLSRVVQS
IPPLEFTFKEDKISLAFVEATLYNPVVAKGSICRELKVFPAECRGRKCTYKGKLVADVSW
SVNGVPKGIIKQSMGQLPIMVKSKMCNLHGMSPKELVKHHEEAEEMGGYFIVNGNEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQFGISMRCVKEEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCASEMLRVVMEEGCTTRAKV
LNYLGERFRVKMSLPEWYTNEQCANYLLDECICIHLKSGVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFMKERMAAWLLSVKLSFDKRGSRLTGRLSAENVMKIF
NMGTDLTKPFEYLLATGNLTSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPSLPTTSLPALLCSLGVT
PVDGSPGKAFSDCFPVVLDGAVLGWVETELAPILVDSLRRFKVLKEKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVHNLALGKQELIGTFEQLYINVGIMEDEIDPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVRGEDSVVFGTKPGDPKVNNKLDADGLPFIGSTLQYGDPFYSYINLNTDQTFVNFY
KSQEACVVDNIKICSNDTGSGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALEY
FGEMLRAGGYNFYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcaacaaagtggaacaatttgcccaaaggtccgagtctaaagaatctgaca
gagggaggattcggcgtcctgaaggagtctcagcatgccgctgttcaggatttaaccaaa
gctcacatcgagtcgtttgaccaggctgtcactgacggactcagccgcgttgtgcagtcc
atccctcctttggagttcacattcaaagaggacaagatcagccttgcgtttgttgaggcc
acgctctacaacccagtggtcgccaaagggagcatctgcagggaattgaaggtgtttcca
gcagagtgcaggggccgaaaatgtacatacaaaggaaagctggtggcggacgtcagctgg
tcagtcaacggcgttcccaaaggcatcatcaaacagtccatgggtcagttgcccatcatg
gtgaagtccaagatgtgtaacctgcacggcatgtcccccaaagagctcgttaaacaccac
gaagaagcagaggaaatgggaggttatttcattgtgaatggaaatgagaaggttatccgt
atgctgataatgccaaggaggaactatcctattgccatgtcaagaccgaaatggaagagc
aggggccagggatacactcagtttggtatttccatgcgttgcgtgaaggaagaacacaca
gccgtcaacatgaacctgcattatctggaaaacgggaccgtaatgctgaactttatctac
cagaaagagctcttcttcctcccactaggctttgcacttaaggcgctggtggacttcaca
gacttccagatctatcaggagctgatcaagggccgcgaggacaactccttctataagagc
tgtgcgtcggagatgctgcgcgtcgtcatggaggagggctgcaccacccgcgccaaggtg
ctcaactacctgggagagcgcttcagggtcaagatgagccttcccgagtggtacacaaac
gagcagtgcgccaactacctgctggacgagtgcatctgtatccacctgaagtccggtgtg
gagaagttctacctcctgtgtctgatgacccggaagctcttcacgtttgccaagcaggag
tgcatggaggagaaccccgacagcatcatgtgccaagaggtgctcactcccggtcagctc
tatctcatgttcatgaaggagagaatggctgcctggttgctgtctgtaaagctgtccttt
gacaagcgaggcagcagactgactggaagactgagcgctgaaaacgtgatgaagatattc
aacatgggcactgacctgaccaaaccctttgaatatctgctggcaacagggaacctcacc
tccaagacaggtctcggcatgctgcagaacacaggcctgtgtgtggtagctgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggcgctgcctttgccaag
atgaggaccacctctgtccgtaagctgctgcccgagtcctggggcttcctgtgtcctgtc
cacactccggacggagagccctgtggactcatgaaccacatgacggccatctgtgagatt
gtggccccaagcttgcccaccacgtccctgcccgccctgctctgttcccttggtgttact
ccagtggatggatctccaggcaaagccttttccgactgcttccccgtggtcctggacggc
gctgtgttaggctgggtggagacggaattagctccgattctggtcgactcactgcgcagg
tttaaggtgctaaaagagaagaagatccctccctggactgagatcgttctggttccaaaa
acaggcaaggccagtctgtacccaggcctgttcctctttacaaccccctgccgcatggtg
cggcccgtacacaacttagctcttggcaagcaggagttgatcggcacctttgaacaactt
tacatcaatgtaggtatcatggaggatgagattgatccaggagtgaccacacaccaggag
ctcttccctcacagtatgctgagcgtggtggctaactttattccctactcggaccacaac
cagagtcctaggaacatgtaccagtgtcagatgggtaagcagacgatgggcttccccttg
cactccttcatggatcgctccgataacaagctgtaccggctgcagaccccacagagccca
ctggtccggccctacatgtacgaccactacaacctggacaactaccccagcggaacaaac
gccatcgttgccgtcatatcctacacaggctacgacatggaagatgccatgattgtgaac
aagtcgtcatgggagagaggctttgcccacggaagtatctacaagacagagctggtggac
ttggcagaaaaggtgcggggagaagacagcgtggtgtttgggaccaagccaggtgacccc
aaagtaaacaacaaactggatgccgatggactgccattcattggctcaacacttcagtac
ggagaccccttctacagctacatcaacctcaacaccgatcagactttcgtcaacttctac
aagagtcaagaggcctgcgttgtggacaacataaagatctgcagcaacgacactggctcg
ggccgtttcaaacgtgtctgcatcaccatgagagtgccacgtaaccccaccatcggggac
aagtttgccagtcgccacggtcagaagggaatcctgagccgcttgtggccggccgaggac
atgcccttcacagagagcggcatggcccccgacatcctgttcaacccgcacggcttcccc
tcccgcatgaccatcgggatgctgatcgagagcatggccggcaagtcaggcgccctgcac
ggcctgagccacgacgccacgcccttcaccttctccgaggagagctcggcgctcgagtac
tttggcgaaatgctccgggcaggcggatacaacttctacggcacggagcggctctacagt
ggagtgagcggcctggagctggaggccgacatttttatcggagtggtctactaccagcgg
ctgcgtcacatggtgtcagacaagttccaggtgaggaccacgggagcgcgggacaaggtg
accaaccagcccgtggggggcaggaacatccagggaggcatccgttttggggagatggag
cgagacgccctgctggcccacggctcgtcattcctgcttcacgatcgcctctttaactgc
tcggaccgatccgtggctcaggtgtgcgtcgactgtggcagcctgctctcccctctgtta
gagaaaccaccaccctactggtcggccatgcgccaccgcaagactgtctgcactctgtgt
ggtaaaagcgactctatagactcagtgtctgtcccttatgtgttccgctactttgtagcc
gagctcgcagcaatgaacattaaggtcaaattagacgttaagtga
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