Etheostoma spectabile (orangethroat darter): 116705377
Help
Entry
116705377 CDS
T08457
Name
(RefSeq) vinculin-like isoform X1
KO
K05700
vinculin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04517
IgSF CAM signaling
esp04518
Integrin signaling
esp04519
Cadherin signaling
esp04520
Adherens junction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116705377
04518 Integrin signaling
116705377
04519 Cadherin signaling
116705377
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116705377
04520 Adherens junction
116705377
09142 Cell motility
04820 Cytoskeleton in muscle cells
116705377
04810 Regulation of actin cytoskeleton
116705377
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116705377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
esp04812
]
116705377
04147 Exosome [BR:
esp04147
]
116705377
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116705377
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116705377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
HrpD6
Motif
Other DBs
NCBI-GeneID:
116705377
NCBI-ProteinID:
XP_032397399
LinkDB
All DBs
Position
17:13955858..13979016
Genome browser
AA seq
1135 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLITYTKNLGPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMNTVKELLPVLISAIKIFVATKSSRGAGVEEAERNRRFTFEKMSAE
INEIIRVLQLTTWDEDAWANKKDMEALKRSLALIESKMAQAKSWLKDPHGQPGDPGEVPL
RVILDEAGKVGELCAGKERKDILATTKALGQMTDQIADLRARGQGPTPGCVQRAGQCSQG
LDLLFGKVDSAARRLEALINAKQAIARRLDAAQAWLADPNGGPEGEENIRALLAEAKRIA
DLCEDPKERDDILRSISEIAGLTARLVELRKQGKGDSPEARALAKQIGAALLTLQSKTNR
AVANMRPAKPAVTLEGKMEQALRWANNPGVDDRGVECEILQWNTGQAAIRGMVGEGRRLA
GGLLGPYRQDMVGRCDRTETLMTSLADMAGRGEAEAPHARATAAQLLDSLKDLRQHMQEV
MTQEVSDVFSDTTTPIKLLAVAATAPPDAPNREEVFQERAGNFEAHSGRLGATAEKAAAV
GTGNKSTVEGIHAAVKHARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVERLT
GLVDEAIDTKSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKRE
VENSEDPRFRDTVKHASDVLSHTISPMVMDAKAVAGNIQDKALQKAYLDSCLRILAAVGK
VREAFQPQEPDFPPPPPDLDQLHVSDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKA
GEVLSEPMMVAARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSN
QPVNQPILAAAQSLHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SEEESEQATDMLVHNAQNLMQSVKETVREAEAASIKIRTDAGCTLRWVRKTPWYQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagtatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggtaaagccatcccagatctg
acggtgccggtggctgcggtgcaggcggcagtcagcaaccttgtacgggtgggaaaggag
actgttcaaaccaccgaggaccaggtgatgaagagagacatgcctcctgcattcattaag
gtggagaactcaagctctaagcttgtccaggcggctcagatgctaaaggcagatccatac
tccgttcctgcgcgagattacttgatcgatggatccagagggatactgtctggaacgtct
gacttgctcctcacctttgacgaggcagaggtgcgtaagataattcgtgtgtgtaaaggt
atcctagagtatctgacagtagctgaggttgtggagaccatggaggacctcatcacttac
accaagaacctgggaccagggatgaccaaaatgtcaaagatgattgaagagaggcagcag
gagctgacacaccaagaacacagacagatgctagtcaactccatgaacactgttaaagag
ctgctgcctgttcttatatcagctataaagatttttgtcgcaaccaagagcagtcgaggt
gccggcgttgaggaggcagagaggaacagaaggtttacctttgaaaagatgagcgctgaa
atcaacgagatcataagagtcttgcagctcaccacgtgggatgaagacgcctgggccaac
aagaaggatatggaggctttgaagagatctctggctttgatagagtcaaagatggcacaa
gctaaaagctggcttaaagacccccatggacaaccaggtgaccctggtgaggttcccctg
cgtgtgatactggatgaagctggtaaggtgggagagctgtgtgctgggaaggagaggaaa
gatatactggcaaccactaaggctctgggacaaatgactgaccagattgcagatctacgg
gccagaggccagggcccgaccccagggtgtgtgcagcgtgcaggacagtgctcgcagggc
ttagacttgttatttggcaaagtggacagtgctgctcgcagattggaggctctaatcaat
gctaaacaggccattgccaggaggctggatgctgcacaggcctggctggctgatcctaac
ggcggtcctgagggagaagagaacatcagagcactgctagcagaggccaagcgcatcgct
gatctatgtgaagaccccaaagagagggatgacatcctgcgctccatcagtgagatcgcg
ggcctcaccgccagacttgtggagctacgcaaacagggtaaaggtgacagcccggaggcc
cgtgcattggctaagcagatcggggcggcactgctgactctgcaatccaaaaccaaccgt
gccgtggccaacatgagacctgccaaacctgccgtcaccttggagggcaagatggagcag
gccctccgttgggcaaacaaccccggagtagatgacagaggagtagagtgtgagatacta
cagtggaacacaggtcaggcagcaataagaggaatggttggagaagggaggagactggca
ggaggcctgttgggtccgtatcggcaggatatggtggggcgttgcgaccgaacagagacc
cttatgacgtctttggcggacatggccggcaggggcgaggctgaggctcctcatgcacga
gctacagctgcacaactgctagacagcctcaaggacctgaggcagcacatgcaggaggtg
atgacccaggaagtatctgatgttttcagtgacaccaccacccctatcaaactgctggct
gtggctgcaactgctccccccgatgcccccaacagagaggaggtttttcaagagcgtgca
gggaactttgaggcccactcaggtcggctgggggctactgcagagaaggctgctgctgtg
ggaacaggcaataagagtacagtagagggaatacatgctgctgtgaaacatgccagggag
ctcacaccacaggtgacctctgctgcacggatcttgttgaagaatccaggaaacaaagca
gcatacgagcactttgacaccatgaagaaccagtggattgacaatgttgagagacttact
ggtctggtggacgaggccatcgacaccaaatctctgttagatgcttctgaggaggctata
aaaaaagacatcgacaagtgccgagttgccatggcgaatgttcagccccaaatgcttgtt
gctggggcaacaagcatagcaagacgagctaatcgagtcctgttggtggctaagcgggag
gtggagaactctgaagatccacggttcagagacacagtgaaacacgcgtcagacgtcctc
tcccacaccatctcaccaatggtgatggatgctaaagctgtggctgggaacatacaagat
aaagctctgcaaaaggcctatttggactcgtgtctgaggatcctggctgcagttggaaaa
gttagagaagccttccaacctcaggagcctgactttcctcctcctcctcctgacctggac
caacttcatgttagtgatgagcaggcaccacccaagccccccctgccagagggtgaggtg
cccccgcctcggccccctcctccagaggagaaggatgaggagttcccggagcagaaggcc
ggagaggtgctcagcgaacccatgatggtggcagccaggcagctgcacgatgaggcacgc
aagtggtcaagcaagcctgaggatgaggaggcagtagaagagagagaggtagatgatgaa
gatgagtttactgatggtgaggatgactatgagccagaactgctgatgatgccctccaac
cagcctgtcaatcaacccattctggcagctgcccagtctctccaccaggaggcgcgcaag
tggtccagcaagggtaacgatatcatagcagcagccaagcggatggctctgctaatggca
gaaatgtctcggctggtgcgtggtggaagcggaaacaagcgtgcacttattcagtgtgct
aaggacatcgccaaggcctcagatgaggtgacgagactggctaaagaagtggccaagcag
tgcactgacagacgcatcagaactaacctgctgcaggtgtgtgaacgaatccctaccatc
agtactcagctgaagatcctctctactgtcaaagccaccatgctgggacggacaaacatt
agtgaagaggagtcagagcaggccacagatatgttggtccataacgcccagaatctgatg
cagtcagtgaaggagaccgtaagagaagcagaagcagcctccatcaagatccgcactgat
gccggatgcacccttcgctgggtgcgcaaaaccccctggtaccaataa
DBGET
integrated database retrieval system
