Etheostoma spectabile (orangethroat darter): 116705399
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Entry
116705399 CDS
T08457
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116705399
04131 Membrane trafficking [BR:
esp04131
]
116705399
03036 Chromosome and associated proteins [BR:
esp03036
]
116705399
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
116705399
Membrane trafficking [BR:
esp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
116705399
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116705399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
116705399
NCBI-ProteinID:
XP_032397439
LinkDB
All DBs
Position
17:complement(11689844..11718094)
Genome browser
AA seq
504 aa
AA seq
DB search
MDIHCKADPFSAMHLSHAGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKAFQRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQQFHPSPDGSVTPLSTPGHTIVPSTT
SPPVTSASNDPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGRKIGHYGSDGSGPGS
DSQGSVESLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYSLPSLNA
GLDDVKPSLSTSTSSDLASSVSQSYSVVTDSHPSYPPSMCVKREPHEASFAPFTPSSVED
STLADILSHQSSLSVDASTSSYPAHAHSHCYSQYASQPLIAGRDMASTTLPGYPPHVPPT
GQGSYPTSTLAGMVPGGDFSGNPYSHPQYTTYNEAWRFSNPALLMPHPVAPHLPLLPLPT
TATSYYGDQFKLQGQGFGLHIVPV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcggaccccttctcggcgatgcacctgtcccacgcagggcac
ggcggtgtgaaccagctcggcggggtgtttgtgaacggcagacccctcccggacgtggtg
aggcagcggatcgtggagctggcccaccagggcgtccggccctgcgacatctccagacag
ctacgggtcagtcacggctgtgtcagcaaaatcctcggcagctatcagaaggcatttcag
aggtactacgaaaccggcagtattaaacccggagtcattggtgggtccaaaccaaaggtt
gcaactccgaaagtggtggataaaattgctgactataagcgccagaatccaaccatgttt
gcttgggagataagggaccgactactggccgagggcgtctgcgacaacgacactgtcccc
agcgtttcatccatcaacaggattatccgcaccaaagtccagcagcaattccacccgtcc
cctgacggatctgttacaccgctctccacgcctggccacaccatagtgcccagcaccacc
tcgccccctgtgaccagcgcctccaacgatcctgtaggatcctactccatcaacggcatt
ctgggtatcccccgctccaatggcgagaagaggaaacgagacgatgttctctggagtggc
aaccacttggatggaagaaaaataggacattatggctcagatggctcaggcccgggcagc
gactctcagggcagtgtggagagtttaaggaagcacctgcgagcagacgccttcacccag
cagcagctggaggccctggaccgtgtgtttgaacgtccttcttaccctgatgtcttcccc
acttcagaacacatcaaacctgaacaggcgaatgagtactcactcccatccctgaacgcc
ggcctggatgatgtgaagccgagcctttccaccagcaccagctccgacctcgcctccagt
gtctcccagagctactctgttgtgacagactctcacccatcatatccaccttccatgtgt
gtaaagcgagagccccatgaggcatcctttgcacccttcaccccctcctctgttgaagac
tctactctagccgacatcttgtcccaccagtccagcctctctgtagatgcctctacttcc
agctaccctgcccatgcccacagtcactgctacagccagtatgccagccagcctttaata
gcaggtcgagacatggccagtaccacattacctggctacccgcctcatgtcccccccaca
ggacaaggcagctaccccacctccacactcgctggaatggttcctggaggggacttttct
ggaaatccttactctcatccacaatacaccacttacaacgaagcatggcggttcagcaat
ccagcattactaatgccgcatcccgtggctccgcacctcccactgctgccactgcctacg
accgccactagttactatggagaccagttcaaactgcagggccagggctttggcctccat
attgtccctgtctaa
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