Etheostoma spectabile (orangethroat darter): 116705402
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Entry
116705402 CDS
T08457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04080
Neuroactive ligand-receptor interaction
esp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116705402
04082 Neuroactive ligand signaling
116705402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116705402
Ion channels [BR:
esp04040
]
Ligand-gated channels
GABA-A
116705402
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116705402
NCBI-ProteinID:
XP_032397451
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Position
17:complement(20107667..20177641)
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AA seq
459 aa
AA seq
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MSFSVSGRTVFTILLISRLLESSMLNAEVKEGEILPPTIQRLMKGYNKYLRPFFDNGPVT
VGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTFI
VDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESWG
YNVNDVMFYWTRGNESVSGLDTLQLAQYTVEDHYTSVSEAVYETGNYPKLVFHFELKRSI
LYFILETYVPSSLLVVLSWVSFWISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCF
IKAIDVYLGICFSFIFGALIEYAVAHFCTLTHMDSHMVMYSHHMHDFDDEMNGIITTISN
HNRAKRRKEAAATPTPTPASLELTVSPSSPSGSEPKPEASPPKHTHWCLTALATVRKVLR
SLNCCHIENPHHIDNYSRVTFPLSFVMVNLLYWIYYLYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcagtatctggaaggaccgtgttcactatcctcctcatcagcaggttgtta
gagagctcgatgctcaacgcagaagtgaaggaaggagagattctacctcctaccattcag
aggctgatgaaaggatacaacaagtacctcaggcctttctttgacaatggtcctgtaaca
gtgggtatgagcctggacatcgccagcattgacaccatatcagagatcaacatggactac
accgccaccattttcctccgccagcgctggacggacgagcgcttggtgtttgagggcaac
aagagcctgagcctcgacgggcggctggtggagctgctctgggtccctgacacctttatc
gttgactccaagaagtccttcctccacgacatcaccgtggagaaccggctgattcgcatc
ttccccaacgggaccgtcctttacgcgctgaggattaccaccaccgtggcttgcaacatg
gatctgaccaagtatcccatggacaagcagacctgcacgctccaactggagagctggggt
tacaacgtcaatgatgtcatgttctactggaccagaggaaatgagtccgtcagtggtttg
gacaccctacagctggctcagtacacagtagaggaccactacacatctgtctcagaggcc
gtttatgaaactggcaattacccaaagctggtcttccactttgagctgaagcggagcatt
ctgtacttcatcctcgagacttacgtcccctccagcttgctcgttgtcctctcatgggtt
tccttctggatttcgctgtcctctgttccagcacgtatttgtataggagtgaccaccgtg
ctgaccatgaccactctgatgatgggagcccggacgtcactgcccaacgccaactgcttc
atcaaggccattgatgtgtacttgggaatctgcttcagcttcatctttggagcgctcatt
gagtacgccgtggcccacttctgtaccctcactcacatggactcccacatggtcatgtac
tcccaccacatgcacgactttgacgacgaaatgaacggcatcatcaccaccatctccaat
cacaacagggccaagagacgcaaggaggccgctgccacccctaccccgactcccgcctcc
ctagaactcactgtcagcccgtccagcccctcgggcagcgagcctaagcccgaggcgtcg
cccccgaagcacacacactggtgcctcaccgctctggccaccgtccgcaaagtgctccgc
tccctaaattgctgtcacatagagaatccccaccacatagacaactactccagagtcacc
ttccccctctcttttgtcatggttaacctgctctactggatatattatctgtacttttag
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