Etheostoma spectabile (orangethroat darter): 116705441
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Entry
116705441 CDS
T08457
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116705441
Membrane trafficking [BR:
esp04131
]
Endocytosis
Others
Others
116705441
Endosome - Lysosome transport
116705441
Endosome - Golgi transport
116705441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
116705441
NCBI-ProteinID:
XP_032397532
LinkDB
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Position
17:complement(9975394..10016369)
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AA seq
1246 aa
AA seq
DB search
MGLWSFWSFSLLVFVFLYPFHPKFVAQAELSYSRANGRFHHVDVTPLEARITRESTVFKV
DNSSKVLSAFKSEAAGTSNPNNVTQVGKETQSGLGKEALFGNKTAPNCRNRLKIPGKKCG
NISEDSQRRPTVNIMLENTFPDSRNRVKRSAGTTNTEHVERSISGDAQSRQRFVETVQGV
SNSRPEYRRTGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKL
YDFNLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESA
VLISSDEGASFEKYPINFNILSLLFHPAQENWILAYSHDSKLYSSMDFGRKWQLVHDNVM
PGRFYWAVMGLDRESDVVHIETRIAKGRAQYVKCRAQRCTEGNRLYLFPGHVDTNSLVVQ
DEYVFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNN
TYSLYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMYLANKLLDNHVKTFIT
YNKGQTWALLPAPATDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKTSVPGIIVAT
GNIGKELSSSNLGMFITSDAGNSWRQIFDEEHNVWFLDNGGALLAVLHAAKPIRHLWISL
DEGKKWDRHSFSLAHLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCM
DGDYQTWNLQNKGELCVMGEKQTYMKRRPGNRCMLAQDYSRISFSEPCPCTAYDFECDYG
WERQAGGKCSPAFWFNPNGLAKSCSTSQSFLNSTGYRKVLSNNCKEEGRNVYSPKRQLCR
PRPPRGLRLSTNQGELSATVGSNVTFMVYLDDGDSLRTSIQLDFGDGIKITYSNLSRTDD
GISHIYRTTGIYRVTATAENNQGSDSNTLFLHITSPVERVYLSAPIVAIRGKKVNLTVVV
WPSHTRTLAFFWWFDNSSEPIITLEGSISYTFQREGKNKVTVQVASGSTIMQDSKVITIK
EFFRSLLLSFSPALDEHNPDIPEWREDIGRVVRTVLSQVSGVAEDQLLVSLYPGLPSTAE
LFILPDEKTSSEHKRGSEEALETISDIFVTALNQGLIQFELKADIRIIVYMTQQTLAPLV
DSNSIHSGSAMLMLLTVVFVGIAAFFIYKFKRKIPWIHVETEDSHEKEPEVISTVGQNDN
MSKVKLSEFPSPKELMEKELEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggtcattttggagtttttcccttttggttttcgtatttctgtatcctttc
caccccaagtttgtggctcaagcggaattaagttattccagagcaaacggcagatttcat
cacgtggatgtaacgccgctggaggcacgtataacccgagaatcaacggtattcaaagtc
gacaatagctcaaaagttttaagcgcttttaaatcggaagcagccggtacttctaacccg
aacaatgtcacgcaagtggggaaagaaacgcagagtggacttggaaaagaggcactgttc
ggcaacaaaacggcaccaaactgtcgtaatcgtctcaaaatacctggtaaaaagtgtggt
aacatatccgaggacagccaaaggcgacctacagtgaatataatgttagaaaacacattt
cctgactcaagaaatagggtaaagaggagtgctggtacaacaaacaccgaacatgtggaa
aggagtataagtggagatgctcagtcaagacagaggtttgtggagactgtccaaggtgtt
tccaattcgagacccgagtaccggcgcactggggaggaagccagagggtctaacccgagg
cagagtgagccgcacctagacacttctacttttgctctatcgggagactcggcgcacaac
caggcgatggtgcactggtccggacacaacagcagcgtgatcctgatcctgactaagctc
tatgacttcaacctaggggctgttactgagagctcactctggagatcctctgattatgga
agcacctacaccaaactcaacgacaaagtgggctcaaggacagttttaagttacctgtac
gtctgccctaccaacaaacagaagataatgatgcttagcgacccagaggtagagagcgct
gttctgatcagttcagatgaaggggcaagctttgagaagtatcccattaacttcaatatc
ctgagcctgctcttccaccctgcacaggagaactggatactggcttacagtcatgacagc
aagctgtacagttcaatggactttgggaggaaatggcaacttgttcatgacaatgtgatg
ccaggacgattctactgggcggtaatggggctggacagagaatcagatgtggtccacatt
gagacgcgtatcgcgaaaggccgcgcccagtatgtgaagtgcagagcccaacgatgcaca
gaaggcaacagactgtacctctttcctggacatgtagacacaaactcactggttgtgcag
gatgaatacgttttcacacaggtaaccaagtcgggacgagccagctactttgtctcctac
atgagagaatcctttaagcggatgaaattacctaaatattgtctcccaaaggacatgcat
ataatcagtacagatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaac
acctacagcctgtatatctcagactcccccggggtctacttcaccctttcgttggaaaac
ctgagaaccagcagaggacctgccggtaatttactggttgacttttataaggttgagggg
ataaatggcatgtatcttgccaacaaactattggacaatcatgtcaagactttcatcaca
tacaacaagggacaaacatgggccctgctgccagctcctgccactgatgtggctggaaat
aaccttcactgcattctgccattttgttcgctgcatcttcatctggagatgtcggagaat
ccctacacgtctggacccatcaccagcaaaacgtctgtgccaggaatcattgtggctaca
gggaatatcggaaaagagctgtcctccagtaaccttgggatgtttataacatctgatgca
ggaaatagctggagacagatttttgatgaagagcacaacgtttggtttcttgacaatgga
ggggctttgctggcagtcttacatgcagcgaaacctattcgacacttatggatcagtcta
gacgaaggaaaaaaatgggaccgccatagtttctccttggcacatctatatgtggacgga
gtattaatggagccagaatctgacaatcatattatcactttctttggacacttcagtcat
cggtcggagtggcagctgatcaagatagactacaagggcctctttagcaggagatgcatg
gatggagattatcaaacatggaacctgcaaaacaagggagagctgtgtgtgatgggcgag
aagcagacctacatgaagcgcaggccaggcaaccgttgcatgcttgcccaggactattcg
aggatctctttctcagagccatgtccctgcacagcctatgattttgaatgtgattatggg
tgggaacgccaggcaggcggaaagtgctcccctgccttttggtttaatcctaatggtttg
gcgaaaagctgcagcaccagccaaagctttcttaacagcacagggtatcgaaaggttttg
tccaacaactgtaaagaggaagggaggaacgtgtactcacccaagaggcaattgtgtcgt
ccgagaccaccccgaggcctccggctgtccaccaatcaaggggagctcagcgccactgtt
ggaagcaacgttactttcatggtctaccttgacgatggagactcgctgaggaccagcatc
cagctagactttggggacggcatcaagatcacatactctaacttgagcaggacggatgat
ggcatcagccacatctacagaacgactgggatttaccgagtgacagctactgctgaaaac
aaccagggatctgacagcaacacactgttcttacacatcaccagtccagtggagcgtgta
tatctctccgctcctattgtagccatcagggggaagaaggttaatctgactgtggtggtt
tggccgagtcacaccagaacattggcctttttctggtggtttgacaacagctccgagccc
attataaccttggagggaagcatctcatacacatttcagagagaaggaaaaaacaaggtc
acggtccaagttgcttctgggagcactataatgcaggattcaaaagttataactattaaa
gagttcttcagatcgctgctgttgtcgttctcgccagctcttgatgagcacaatcctgac
atcccagagtggagggaggacatagggcgggtggtgcggacagttctgtcacaggtttct
ggggttgctgaagatcagctgctggtgtctttgtatcctggacttccatctacagcagag
ctctttatcctgcctgatgagaaaacatcaagtgagcacaaaagagggagtgaggaggct
ctagagacgatatcggatatttttgtcactgcactgaaccaaggcctgattcagtttgag
ctgaaagcagatattcgtattattgtgtacatgactcagcaaactttggcaccacttgtg
gattcaaactccatccacagtgggtcagccatgctgatgctgctcaccgtggtgtttgtt
ggtatagcggcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttgag
acggaggacagtcatgagaaggaaccggaggtgatcagtacagttggtcagaacgacaac
atgtccaaggtcaagctcagtgagtttccctctccaaaagaactcatggaaaaggagctg
gaggctagaagcagaggaggaattggaagaaatatggagagaattgttacaagggaattc
ccaaactgtactaatgtgtaa
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