Etheostoma spectabile (orangethroat darter): 116705527
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Entry
116705527 CDS
T08457
Symbol
six2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116705527 (six2)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
116705527 (six2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
116705527
NCBI-ProteinID:
XP_032397619
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All DBs
Position
17:6443293..6446694
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AA seq
290 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLTSSMNGNKSLLGSSDDDKTPSGTPDHTSQSPALLLGSHT
GLQSLHGLAPPPGPSAIPVPSGADSVHHHHSLHHDTILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcttccgacgtttggttttacgcaggaacaagttgcgtgtgtttgcgaagta
ctccaacaaggggggaacatcgagcggctggggcgcttcctctggtcgctcccggcgtgc
gaacacctccacaaaaatgagagcgtcctcaaagcgaaagccgtggtcgctttccaccgg
gggaacttccgagagctctacaagatcctggagagccaccagttttcgccgcacaaccac
ccgaagctgcagcagctgtggctcaaagcgcactacatcgaggcggagaagctgagaggc
cgcccgctcggcgccgtggggaagtaccgcgtccggagaaagttccccctgcctcgctcc
atctgggacggagaagagacaagctactgcttcaaggaaaagagcaggagcgtcctccga
gagtggtacacccacaatccttacccatccccgcgggagaaaagagagctggccgaggcc
acgggactcacgaccacgcaggtcagcaactggttcaaaaaccgacggcagcgagaccga
gcagcggaggcgaaggaaagagaaaacaacgagaactccaacagcaatagtcacaaccca
ttgacttcttccatgaatggaaataaatctctattggggagctcggacgacgataaaaca
ccctcggggacaccggatcacacgtctcagagcccggctctgctcctcggctcacacacc
ggtttacagtccctgcacggcctcgcgcccccgccgggacccagcgccatcccggtaccc
agcggtgcagactcggtgcaccatcaccactcattgcaccacgacaccatactgaaccct
atgtcttctaatctagtggaccttggctcttaa
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