Etheostoma spectabile (orangethroat darter): 116705586
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Entry
116705586 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
esp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116705586
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116705586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116705586
04090 CD molecules [BR:
esp04090
]
116705586
Cell adhesion molecules [BR:
esp04515
]
Cadherins
Major cadherins
116705586
CD molecules [BR:
esp04090
]
Proteins
116705586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
116705586
NCBI-ProteinID:
XP_032397739
LinkDB
All DBs
Position
17:3677185..3708721
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AA seq
782 aa
AA seq
DB search
MMAWLQLWTMGLVAILVFSISLAEDSGLPAVEAEQRGPVEIVKKESHPVLFRQKREWIWN
SLYVVEEQPVPIAYKIGQLKSSQTAGVKNFKIEGEGANTIFIVDHKGDLFVNRTLDREEK
NEYHLTARMYDGNNKLIEDSGDFVVQVTDINDNTPVFPKTYNGSIMERSTIGTKVVEVRA
TDADDPTTANGELRYSLVHYVDRTTFEIDSITGVISCKTNTLDRETKNQYVVVVQAQDMR
GMATGSTATTSVTITITDTNDNMASFTRKTYELHVPEDLKLNEKIGTLELEDRDQIQNKE
PIFNILNGNTNIFNIELSPNKDGNLMLKQALDYETTNSYTFTVQVRENLRFPADNDKSAV
TIAKVNIKVLDVDEAPVFSQPVYTFTVIEERIVSNIGTVIARDPDRANKSIRYSILDKDC
PISINPLTGQLSTLRMLDRELEATHMFQVKAQEEPSGLESFVKVNIIVQDINDNKPELTV
DEIFVCENDLTNMVIGTLRATDKDDQPASFSFSLASESSNFSIKDYGNNTADIIVKQGPF
SLDDPKDYSMDVRISDGGRPIQTSITKVAIKSCRCDARRIPTQCKAGARRMGVSVHALIA
ILLCILTILVIVILFVMRKRYQKDSLASMKNSGEIHEQLVTYDEEGGGEMDTNGYDVSIL
TSACHDGSLLRHPDHHPHPSLYAMVQKPPHHAQPTACKGDMAVMIXXXKKDEADHDRDGF
PYDTLHIYGYEGPESLAGSLSSLQSSSTGSNLDYDFLNDWGPRFRTLAELYGVDAPDYYH
QY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttggctccagctgtggactatggggcttgtggccatcctggtcttttccatc
tctctcgctgaagattctggcctaccagcggtggaagcagagcagcgaggccctgttgag
attgtaaaaaaggagtcccatcctgtcctgttcaggcagaagagagagtggatctggaac
tctctctacgtggtagaggagcaaccagtacccatcgcctacaagataggacagcttaag
tcaagccagacggcaggggtgaagaactttaaaatagaaggtgaaggagcaaacaccatc
ttcattgtggatcacaaaggagacctgtttgtcaacagaactctggacagagaggagaag
aacgaataccatttgaccgccaggatgtatgatgggaacaacaagttgatagaggattct
ggagactttgttgtccaggtgacggatatcaatgacaacaccccagttttccccaaaaca
tataatggatccattatggaaaggtccaccataggaactaaagtggttgaggtgagagca
accgatgctgatgaccctaccactgctaatggagagctcagatactctttggtccattat
gtagaccggacaacatttgaaatcgacagcatcacaggtgtgatcagctgcaagacaaac
actctggaccgggaaaccaagaatcagtatgtggtggtggttcaagctcaggacatgaga
ggaatggccactggcagcacggccaccacctctgtcaccatcaccatcaccgacaccaat
gacaacatggcttctttcacccgaaagacatatgaactgcacgttccagaggatctcaag
ttgaatgagaagataggcactctggagttggaagatagagatcagattcagaacaaagag
ccaatcttcaacattctaaatggaaacaccaacatttttaacattgaactcagcccaaac
aaggatggaaacctcatgctcaaacaggctctggactacgagacaacgaacagctacact
ttcactgtccaggtgcgagaaaacctgcgttttcccgctgacaacgataaaagtgctgtc
accatagccaaggtaaacatcaaggtgctggacgtagacgaggcaccggtcttctcccaa
cccgtctacactttcactgtgattgaagaacgtattgtgagcaacataggaacagtcata
gccagagatcctgacagagccaacaagagcatacggtactccatcttagacaaggactgt
cctattagtatcaacccgctcacaggtcagctgtccaccctgaggatgctagacagagag
ctggaggccacccacatgtttcaagtaaaagcacaagaggagccaagtggtttggagtca
tttgtgaaagttaacatcatagttcaggacatcaatgacaacaagcctgaactgactgtg
gatgagatcttcgtatgtgagaacgacctcactaatatggtaattggaacattgagagcc
acagataaagacgaccagccagcttccttcagtttcagcctagccagtgagagctccaac
ttctccatcaaagactatggcaacaacacagccgacatcattgtgaaacaggggccattc
agcctggatgaccccaaggattacagcatggatgtgcgcatcagcgatggagggcggccc
atccagaccagcatcactaaagtggcaatcaagtcgtgtcggtgtgatgccaggcggatt
cctacgcagtgcaaagccggtgctcggaggatgggagtgagtgttcatgccctgatagcc
attctgctctgcatactgaccatactggtcatagtgattctgtttgtgatgaggaagcgc
taccagaaggattcactggccagtatgaagaacagcggggagattcacgagcagctggtc
acgtacgatgaggagggaggaggagagatggacactaatggctacgatgtttcaatcctc
acttccgcttgccacgatggctccctgctccgtcacccggaccaccacccccacccctct
ctctatgccatggtgcagaaacccccccaccacgcacaacccaccgcatgtaagggcgac
atggccgtgatgatcnnnnnnnnnaagaaagacgaggcagatcacgacagagacggcttc
ccgtacgacactctccacatctacggctacgaggggccggagtctttagccggaagcctc
agctcgctgcaaagttcttccaccggttccaacttggattacgacttcctgaacgactgg
gggccgaggttcaggaccctggccgagctgtacggtgtggatgcacctgactactaccat
caatactga
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