Etheostoma spectabile (orangethroat darter): 116705793
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Entry
116705793 CDS
T08457
Symbol
hmbox1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116705793 (hmbox1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116705793 (hmbox1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_31
HTH_24
HTH_37
NOC3p
Motif
Other DBs
NCBI-GeneID:
116705793
NCBI-ProteinID:
XP_032398082
LinkDB
All DBs
Position
18:26583275..26606678
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AA seq
510 aa
AA seq
DB search
MRPVLNSRMSEFSEEPRFTIEQIDLLQRLRRTGMNKQEILHALDTLDRLDREHGDKFGRR
TSSSSSSSSCYGVGGANNTSASNTTTSFNNNNTASATATSSATCNGNSGESNSGGDHSAA
ASSSTTSKISTATQTQFGNAGGLSPSPSNSYDTSPPPGPPPPSAILPSPVSLVALTQNGR
DSLAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELLRRDGSMVKEEIKAF
LGNRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRP
APLPLEEMEWRQTPPPITTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEI
ANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGG
HSNSDDIDGNDFSEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDGAAHSEHQDPISLAV
EMAAVNHTILALSRTGGVPSDIKTESLEDE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgtattaaacagcaggatgtctgagttcagcgaggagccgcgcttcaccatc
gagcagatagatctgctgcagcggctgcgtcgcaccggcatgaacaagcaggagatcctg
cacgctctcgacactctggaccggctggaccgggagcacggcgacaagtttgggcgccgc
acctcttcttcctcctcctcctcgtcctgctacggagtgggcggggccaacaacacctct
gcctccaacactactacatcattcaacaataacaacactgcctcagcaaccgccacctct
tccgcgacgtgcaacggcaacagcggtgagagcaacagtggaggcgatcactccgccgcc
gcctcctcctccaccacctccaaaatctccaccgccacgcagacgcagttcggcaacgcg
gggggactctcgccttcgcctagcaacagctacgatacctccccgcctccgggcccacct
ccgccttccgccatcttgccctcgccagtctcgctggtggctctgacgcagaacgggcgg
gatagcctagccgccacgcccaacgggaagctgtcccctcccagatacccagtgaacagc
gcggcggcagcgcgggcgtttgggttcgaagccacagaggaggacctggacattgacgat
aaggtggaggagctgttgaggagggacggcagcatggtgaaagaggagatcaaagccttc
ctggggaacaggaggatctctcaggcagtggtggcacaagttaccggcatcagccagagc
aggatctcccattggctgctacagcacggctccgacctgagtgagcagaagaagagggcc
ttctaccgctggtacacgctggagaaaaccacgccaggtgccactctgaacatgcggcca
gctccgttacctctggaggaaatggagtggaggcaaaccccaccccccatcaccactgcc
cccggaaccttccggctgcgtcgaggaagtcgcttcacctggagaaaagagtgcctggct
gtgatggagagctacttcaacgacaaccagtacccagatgaggccaaacgggaggagata
gcaaacgcctgcaatgctgttattcagaagccagggaagaagctgtctgatctggaaagg
gttacctcgctgaaagtttacaactggttcgccaaccgtcgcaaagagatcaagagacgg
gccaacattgaagccacaatcctggagagtcatgggatagacgtccagagtccaggggga
cactccaacagcgacgacatcgatgggaacgacttctcagagcaggcatgtgacctgccc
tattttgataagagacctctcagccgaccctttggcctttaccggctggagcccacctcg
ccaacacaggacgacggcgcggcgcacagcgagcaccaggaccccatctctctggctgtg
gagatggctgccgtcaaccacaccatcttggccctgtcccggaccggaggggtgcccagc
gacatcaagacggagtccctggaggatgaatga
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