Etheostoma spectabile (orangethroat darter): 116705875
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Entry
116705875 CDS
T08457
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116705875 (casp8ap2)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116705875 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
YabA
INO80F
Motif
Other DBs
NCBI-GeneID:
116705875
NCBI-ProteinID:
XP_032398228
LinkDB
All DBs
Position
18:complement(19540302..19553448)
Genome browser
AA seq
1877 aa
AA seq
DB search
MENIDTKDASGLLVPDVSEDSVDIYEGLDIGFSSDAEKSSPKASQLKDSMDLYEELVTEE
QQSKEASYLELKSRFQAAQLQIKELRRRVEQMEIQNTGLNTENYHLKKNISALLQTARQE
VTRKDAEIQRLIQQSHKGFHHPQSHINNRRNPSSLSRISAGSSMSRPPPPPPPSLPLPSL
PSSPPPPRPASPPREDALPRVPPPSSKRESNSCTSQPKASSRKSSSSSSTRHSEPGKHKS
THREEKYQSQNLSEPPDRRHRSCSDLDMSHKVDKDTGRRHDSRSCKSRDYLNVEGRHRSD
ESRTPPPEIPHAAVFFDDKNGRSRERRPDAAKMSTPDCEHSAAHSSKQSHGRDHRKIQTS
DKHFGRKKDGKDSSSHHRAERCSESSKERGGKRLSKDYQRKEDRRREEDVSRKHKRSTLS
ETSREREKARAKESDQGRVDASSKEKQKKTHEASKRSSEEPNITEKSLVEDNSPNRKLCF
METLNLTLSPIKKQVLPANTTQAELPPVDKVVENWADDESSQPNVEDMCVIDELNSSELE
PLLEDVTDAPKKPSSETTHKSCDDGKDVQEEDKTPSKSPAADKHCEDRSVQSTSSHILHP
GAADNPMAVHLTATSAEISSLKARNYEDKIQQASDSQGNDCGSMEATDGDSDTSRCNYEQ
HTGNSSHKVHPRNDIDQSVPIADPVMLDSSVERKCTNPKPAVQKSLPVDSEDAAASPLGG
NPVAEDITDKANHESPQMSTTILPQDCQQGLLVSNSIHKKDAGHTQDGPKDAVSSTISLE
SLPQEGLSLDEAIYVLTQTNEDINDRSSICTKPSSSTGCIAVSKVSSTTEETALPEKYRN
LTFTPKKIFTPRKSHSVEPSSSVPLLHDEDSMMLTLSNLKRIPDAISPLRSPIRITKRSL
LHVHGKPGHVKSLQKEFSTTAVDANTKKLDVNKENKYPGSPANHDAQHLVDEVSDLPSSL
SDTELEEGEIFSESDGEAADSPLPANKKAKLVQPIKHKPSPKSVLKRKSKERLVASKDTH
ETAGVATPSPKSRFKTVCPAATKESFSTIEEVMETFKMVRTEIRKKYMKLHKTFPKKSFY
GVMFNYQESFLEFVDGAHFGQICSQSRELKSTLKKLIVSVFGKVSNNGIVKRIFEQQAVN
LKQRLWDFVDVQVDYLFKDIYTTLKSLCKPARAQAEDAMPRGNEKVSRQPSAKRTPCQTP
DAQSPPSSLKQIKPCAVAPYKTGLGSRGKDIRITHVEKDRSVNPHPTSCSHTQIVANHLP
SKSIPSTPEKSNKSSLVVPQNVSLLEKTDFELLTEQQASSLTFNLVRDTQMGEIFKCLLQ
GSDLLESNGITGDSTAWSLSTPRKDGERLLSITTPTKFNSPSKLFSPTKFATPSKLIATW
SSISPRKMASPQTKDQIPLNPALFDESCLLEVPSESSTMLQSSLASQRSYSILAEDLAVS
LTIPSPLKSDGHLSFLQPSGMHHISTPDSVISAHISEDALLDEEDASEQDIHLALDTDNS
SCGSSSSQVLATPFLFKPDLPMHALVMEKSNDHFIVKIRQAATGADARLTAEESSGQILT
EENDVDTKDSRAKAVLSDKSWNETPLNAVPSEKSIPGTNADIHLTPDESLTLTKHPSHKK
DLSTQQHTSKVCSPKDSQKLSESLKTTPSDKSLPNGAHFFGQISPATSREDIPATADEKA
SESPHRAEEGTALSKAQERISCSETVVSDTSPHQPADSSKTNQRSQVSASHDSDEMQVSE
RSLVIAEDAINSTPEREQKDCDKGRKRKKHQKSKAKRFRKEYEESREEDGERESKSSPAS
LSPNSLYAKNVIRKKGEVVLAWTRDEDRAILIDLKTKGASRDTFSALSEKLDKPSEQIAD
RFYQLMKLFKKQEKMDT
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggagaacattgacaccaaggatgcatctggtctcttggtacctgatgtcagtgaagat
tctgtggatatctatgaaggcctggatatcggttttagcagcgatgcagagaagtcatct
ccaaaggcttctcagcttaaggactctatggatctttatgaagaactagtcacagaagaa
cagcagagcaaagaggcatcgtacttggagttgaaatccagattccaggcagctcaactc
caaattaaagagttgcgcaggagagtggagcagatggagatccagaatacagggttgaac
actgagaactaccatctcaaaaagaacatctctgcacttttacaaacagctcgacaggag
gtgactcgaaaagatgccgagattcagaggttgatccaacagtcacacaaaggtttccac
catccccaatctcacatcaataatcggcggaatccaagttccttgagtcggatctcggca
ggcagctccatgagtaggccacctcctccacctccccccagtcttccgcttccttcttta
ccatccagccctcctccacctcgaccggcttcgcctcccagggaggatgcccttcccagg
gttcctcctccatcctccaaaagagaaagcaatagttgcacctctcagcccaaggcatcc
agcaggaaatccagcagcagttcatcaacacgacacagtgagccaggcaaacacaagtcc
acacacagggaagaaaaatatcaaagtcaaaacctctctgaacctccagatagaagacat
agaagctgttcagatcttgacatgtctcacaaagttgacaaggacacaggacgaagacat
gactccagatcatgtaaaagcagggactacctaaatgttgaggggcgccacagatcagac
gagtcaagaacccctccaccagagattccacatgctgccgttttctttgatgacaagaat
gggagaagtcgagaacggagaccggatgcagccaaaatgtccacaccagactgtgaacac
agtgcagctcacagctctaaacagagccatggccgagatcatagaaaaattcagactagt
gacaaacattttgggaggaaaaaggacgggaaagattcctcttcacatcaccgcgctgag
cgctgcagtgagtcctccaaagagaggggagggaaaagactgtcaaaggattatcaaaga
aaggaggatagacgacgtgaagaggacgtcagcagaaagcataagaggagcactttgtca
gagacgagcagagaacgtgagaaagccagagcaaaagaatcagaccagggtagagtggat
gccagtagtaaggaaaaacaaaaaaagacacatgaggcctcaaaaaggtcatctgaagaa
ccaaatatcacagagaagagcttggtggaggacaatagtccaaacagaaaattgtgtttc
atggaaacattgaatctaaccctttcaccaattaagaagcaagtgttgcctgccaatacc
acccaggctgagctaccaccagtagacaaggtagtggaaaattgggcagatgatgaaagt
tcacaacctaacgttgaggacatgtgtgtgattgatgaactaaacagcagtgaattagaa
cctctgttagaagatgttacagatgcccccaaaaagccaagctctgaaacgacacacaag
agttgtgacgatgggaaagatgtccaggaggaagacaaaactccgagtaaaagtcctgct
gctgataagcattgtgaagaccgctcagtccaatctacctcatctcacatcctacaccca
ggtgctgcagataatccaatggctgtgcatctcacagcaacatcagcagagattagttct
ctaaaagcgagaaattatgaagacaaaatccagcaggcctcagacagccagggaaatgat
tgtggatctatggaggctacagatggtgacagtgacacatccagatgcaattatgaacag
cacacaggcaattcttcacacaaggtacatcctagaaatgatattgatcagtctgtccct
attgcagaccctgttatgcttgattcaagtgtagaacgtaagtgtacaaatcctaaacct
gcagtacagaaaagcctccctgtggattcagaagatgcagctgcttcccccttaggagga
aatccggtagctgaagatattacggacaaggccaaccatgaaagtccacaaatgtctacc
actattctgcctcaggactgtcagcaaggactcctggtttccaattccattcacaagaaa
gatgctggtcatacgcaagatggtcctaaagatgcagtatccagtacaataagcctggaa
tcccttccacaagaagggctgagtctagatgaggctatttatgttttaacacagacaaat
gaagacatcaatgacaggagtagcatctgcactaagccgagctcctccactggctgcatt
gccgtgtccaaagtcagcagtaccaccgaggagacggcgctgccagagaagtacaggaac
ctaactttcacaccaaagaagatcttcacccctcgcaagagtcatagcgttgagccttcc
agttctgtgcctttactccatgatgaggactccatgatgctcacactgagcaatctgaag
agaatccctgatgccataagccctctgaggagccccatacggataaccaagaggagtctt
ctccatgttcacggcaagccaggtcatgtcaagagccttcaaaaagagttctccaccaca
gctgttgatgccaacacaaagaagttggacgttaacaaagaaaacaaatatccaggttct
cctgcaaaccatgacgcacaacacttggtggatgaggtatccgacctgccttcaagtctc
tctgacactgaactggaggaaggggaaattttcagcgaaagtgatggggaggctgcagat
tctcctcttcctgcgaacaagaaggccaagttagtacagccaatcaaacataaaccaagt
cctaagtctgtgctaaagaggaaatctaaagaaaggttggttgcatcaaaagacactcat
gaaacagcaggtgtagcgacaccaagtccgaagagtcgttttaaaaccgtttgtcctgca
gcaaccaaagagtccttttccaccatagaggaagtaatggagacattcaagatggttcgt
actgagatccgaaaaaagtacatgaagcttcataaaacctttcctaagaagagcttctat
ggtgtgatgttcaattaccaggagtctttcttagaatttgtagacggtgctcattttggt
caaatatgcagtcagtcaagggagctgaaatccacgctaaagaaattgattgtttctgtg
tttggcaaagtatcaaataatggtattgtgaaacgcatttttgaacagcaagcagtcaat
ctgaagcaaaggttgtgggactttgtagatgtccaagtcgactacttgttcaaggacatt
tacacgacactaaagagcctttgcaaaccagcgagagctcaggctgaggatgccatgccc
cgtggaaatgaaaaagtatccagacagccttccgcaaagagaacaccgtgtcaaacaccg
gatgcacaatcgcctccgtccagcctgaagcaaatcaagccatgcgctgtggcaccttac
aaaacaggccttggaagcagaggaaaggatatcagaatcacacatgtggagaaagacagg
agtgttaatccgcatccaacaagttgctcacatacacaaatagtggccaaccaccttcct
tcaaaaagtattccttcaactccagagaaaagtaacaaatcttctttggttgtccctcaa
aatgtgtctttgcttgagaaaacggactttgagcttctcacagaacagcaagcttccagt
ttaacattcaacctggtgagagacactcaaatgggagaaatcttcaagtgcctcctgcaa
ggatccgacttgttagaaagcaacggcatcactggagacagcacagcctggtccctcagt
acacccaggaaggatggagagaggctcctcagcattaccactcccactaaatttaactct
ccgtccaaactgttctcgccaacaaaatttgctacaccctcaaaacttatcgcgacatgg
tctagcatttcccctcgcaagatggcgtctccgcagaccaaagatcagatcccgctgaat
ccagctttattcgatgagagttgtttgttagaagtgccatcagagagtagcacaatgctg
cagtccagcttggcttcacagaggtcgtattccattctagctgaagatctggcagtgtcc
ctcaccattccatcacctctcaagtccgacggccaccttagcttcctacagccgtcgggc
atgcaccacatatccacgccagacagcgtcatcagcgctcacataagtgaggacgctctg
ctggacgaggaagatgcttcagagcaggacattcacctggccctcgacaccgacaactcc
agctgtggctccagcagcagccaagtactcgccacaccttttttgttcaagcctgacctg
cccatgcacgcgcttgtgatggagaagtccaatgatcatttcattgtaaagattcgccag
gcggccacaggagcagatgccaggctcactgccgaggaaagctcaggtcaaatactaacc
gaagaaaatgacgtggacactaaagacagtcgagcaaaagctgttttgtcggacaaatcg
tggaatgagactcctttaaatgctgtaccgtcagagaaaagtatacctgggaccaatgca
gacatccatctcactccggatgagagcttaacactaacaaaacatccatcccacaaaaaa
gatttgtcaactcagcaacatacctcaaaagtttgttctcctaaggattcacagaaactg
tcagagtctctgaaaactactccttcagacaagagtttacccaacggtgctcatttcttt
ggacagatcagcccggcaaccagcagagaagatatcccagccacagccgatgaaaaggca
agtgaatcaccccacagagcagaagaggggacggctctttctaaagctcaggaaaggatc
agttgctctgaaaccgtggtatcagataccagtccacatcagcctgctgacagctccaaa
actaatcagaggagccaagtgtcggcgtcacatgattcagatgaaatgcaggtgtcagag
agaagtctcgtcattgcagaggacgccattaacagcacaccagagagagagcaaaaggat
tgtgacaaaggtcgaaaacggaagaagcaccagaaatcaaaagccaagcggttcagaaag
gagtatgaggagagtagagaagaggacggtgaacgtgaatccaaatcctccccagcatct
ctctcccccaacagtctctacgccaagaacgtgatcaggaagaagggcgaggtggtgctg
gcgtggaccagagatgaagatcgagctattctgattgacctgaagacaaaaggggcttca
cgggacactttctctgccttgtcagagaaacttgataagccgtcagagcagattgctgac
agattctaccagctgatgaagctttttaagaagcaggagaagatggacacttga
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integrated database retrieval system
