Etheostoma spectabile (orangethroat darter): 116705940
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Entry
116705940 CDS
T08457
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116705940 (lama4)
04518 Integrin signaling
116705940 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116705940 (lama4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
116705940
NCBI-ProteinID:
XP_032398315
LinkDB
All DBs
Position
18:complement(17882440..17933762)
Genome browser
AA seq
1872 aa
AA seq
DB search
MAAKSLSCLLCILSGIAYPASAARLGEQQQSVLKVCAKGFFMSAQDICLPCNCKGLADYC
EDITGICFNCKGHSTGDFCEMCEDGYMLAPGLDGRHACRPCACPLSVPSNNFAVHCDKGG
AILRCKCQEGYAGHFCERCAPGYYGNPMAIGNSCKRCDCNSNSDPNLIFSECHNVTGHCQ
HCWGNTSGANCERCAPGFYGDAISAKNCRECECNECGTSSCDDRRGVCHCKPGVTGRLCD
QCEEGYSGFSSCQGCRRCECGPASLRSTCHPLTHSCLCRPGAGGRYCERCLPGYWDYSPA
GCQKCDCESGHCDMHTGECLPEAATVNLCNNSCDNCIWHLIGDLRLSNKTLDQLKVGMLN
ISTGAAANDRLKYYNYTAQRLQTQFLGWRNKSSVMKDQTGELEKATDAVVLDIKQLGESE
SVVKTLGNELDNDTLETVTLAEQLSTNLTDLNLRIEEMIHDWELYSVHQDVDPELARQNT
ERAQGMVARMRTLDLSPREPIATDESTEAHDLLRRIRQMEKKLMSTDGRLPPVREILSRF
STKLSDAQGSLQKAANTVQQTVDRNRASVLKFQRNEAKQQRLTEDHAAVNDTLEVARGSV
SETQRTVSEVDAMVQNVSGYHASIDGASLKLMEKTERLSLADRDLVQRADEHADELDRQA
NKLEKDLRESDANGFVQKAISAANVYNNIVKYIHDANITSLTTYNLSQRAEDAIAGINKH
LEYLVTKSDNVFKESVSLHSEQIEVEAEVIDKLKYIEETKETMVQNHKKLAEIVEDINGI
HPDRTPHRLEFTLDVAEGTLNRSAEVLQTITPISSKVEEWAKNMRNDEYSTAAYDQAIQS
AGEAVENLNVLVPELLDKLKVVEQKKPVNNVTTNIMRIRELIAQARSVAKKVQVSMKFNG
HSSVEVHPPSNLEDLKTVTSISLFMRVDPDKDPIEDRFILYLGDRNGKKDYMGLAIKNDN
LVYVYNLGGEDVEIPLGSKPVSQWPAVFNYIKVERLGRHGKVFLTIPSQSSTDEQKFIQK
GEAPGTDSLFDIDPKDIVFFVGGVPADVRLPPPLSLAPFVGCIELGSLNNDVISLYNFKE
THKMDVVKSAPCSRYKLAFSQSRIASYLFDGTGYALINNMERRGKFGVVTRFDISVRTVA
NNGVLFLMVNEEKFFLLEIKNGFLRLMYDFGFSKGPELLENNLPKMQINDARYHEVSVIY
HQSKKVILLVDKSHVKSMENPKTTLPFSDIYIGGAPSSILKSRPELSAVVNLKGCVKGFQ
FQKKDFNLLEEPGTIGISSGCPEESFMSRKAYFTGESYLGSTAKISPFDNFEGGLNFRTL
QPGGLLFYLSDGSDEFSISLENGAVVMNCRGTRVKSHKKQYSDGRTHFLVATVNSQKYAL
VVDDKDKQEKKRPSSATRSSSGTAVKTFYYGGSPSSSFKNFTGCISYAYINRQDRDIEPE
DFQRYTEKVQTSLQDCPVQRPPAALMSRHREHSSRAKQSQSQKVSSLPLGLMELKSDDQE
PSELNIKPCYLSSSPRAARQAFHYGGIANSRQHYTDLPNSFSERSHFSLSLKTHSSFGLI
FYVSDVQEDNFMALFLAHGKLVYTFNVAHQRVKIKSEEKYSDGAWHNVIFIRDGSMGRLI
IDGLTVLEDKAHGSNVSWHVSSPLYVGGVPAERAQKNIQRNSAYSFTGCLKNLQLDGQWL
SSVAETFGVTPCFEGLSEAGTYFSEEGGYVVLDETFDLGLRFELVMEVRPRVASGVLLHV
RTAEGYFTMYIHHGEVVALVNDGSHEFFTKVSPFQGLCAGNWHRITVIRDANVVQLDVDS
EVNHVVGPLNPSSTDTRKPVFIGGAPDLPESIGTRKAWVGCMRNLTINNSRVSFSKAVVV
SGAVSVGTCPAA
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaatccctgtcctgccttctctgcatcctatcagggattgcctatccagct
tctgccgccaggctgggggaacagcaacagtcggtactgaaagtgtgtgcaaaggggttt
ttcatgagtgcgcaggacatttgcctgccatgtaactgcaaaggcttagcagactactgt
gaagacatcactggcatttgttttaactgcaagggccacagtacaggtgatttctgtgaa
atgtgtgaggatggctacatgctggctcccggcctggacggacgccacgcctgccgaccc
tgcgcctgccccctctcggtcccatccaataacttcgcagtgcactgtgacaaaggaggt
gccattctgcgctgcaagtgtcaagaaggctacgctggtcatttctgtgagaggtgtgct
ccaggttactacggcaacccaatggcgattggtaattcctgtaagagatgcgactgtaac
agcaactccgaccctaacctgatcttcagcgagtgccacaatgtgacgggccactgccag
cactgctgggggaacacctccggggccaactgtgagaggtgtgccccaggattctatggc
gatgccatcagtgccaagaactgcagagagtgcgagtgcaatgaatgtggcacctcttca
tgcgacgaccggagaggagtatgtcactgcaagccgggtgtcaccggacgactctgtgac
cagtgtgaggaggggtactctggtttctccagctgtcagggctgtcggaggtgtgaatgc
gggccagcttcccttcgctccacctgccatccgctcactcacagctgtctatgccgcccg
ggggctggaggtcgttactgcgagcgctgcttgccgggctactgggactacagccctgcc
ggctgccagaagtgtgactgtgaaagcggccactgtgatatgcatacaggagagtgcctg
ccagaggctgcaacagtcaacctgtgcaacaacagttgtgataattgcatttggcatctg
attggggacctgcggctgtccaataagactctggaccagctgaaagttggaatgttgaac
atctctaccggtgctgctgccaacgacaggctcaaatactacaactacactgctcaacga
ctgcagactcagtttcttggctggagaaacaagtcctctgtgatgaaggaccagactggg
gagctggagaaggccacagatgccgtggtgttggacatcaaacagctgggagaatcggag
agtgtggtcaagactctggggaacgagctggataacgacacgctggagacggtcactctg
gctgagcagctcagcacaaacctcacggatctcaacctacgcatcgaagagatgatccat
gactgggagctgtacagtgttcaccaggatgtggatccagagttggccaggcagaacact
gagcgggcccagggaatggtagccaggatgaggacactggacctgtccccacgagagccc
atcgccacggacgagtcgactgaagcccatgacttgctgaggcgtatccgtcagatggaa
aagaagttgatgagcacagacggccgcctcccacctgtcagggagatcctgtcccgcttc
tccaccaagctgtctgacgctcagggctctctccagaaagcagccaacaccgtccagcag
acggtggacaggaacagagccagtgtcctcaaattccagaggaatgaggcgaagcagcag
aggctgacagaggaccacgctgctgtcaacgatacactggaagtggccagaggttccgtc
tctgaaacacagaggactgtgtctgaggtggatgctatggtgcagaacgtgagcggatac
catgcgtcgatcgatggcgccagcctaaagctgatggagaagactgagcgtctctcgctg
gccgacagagatctggtgcagagggccgacgagcacgccgacgagctggaccgacaggcc
aacaaattggagaaggacctgagggagagtgacgccaatggctttgtgcagaaagctata
agtgctgccaacgtctacaacaacatagtgaaatacatccacgatgccaatatcacctca
cttaccacctacaacttatcccaaagagcggaagatgccatcgctgggatcaataagcat
cttgagtacctggtaacgaaaagcgacaacgttttcaaggaatctgtttcattacattca
gaacaaattgaggtcgaagctgaagtgattgacaagctgaaatacatcgaggagaccaaa
gagaccatggtccaaaaccacaaaaaacttgcagaaatagtggaggatatcaatggaatt
catccagatagaacaccacatcgactggagtttaccctggacgtggctgaggggactctc
aaccgctctgcagaggtccttcaaaccatcacccccatcagcagtaaggtggaggagtgg
gccaaaaacatgaggaacgatgaatactccacagctgcttatgaccaggccatccagtct
gccggggaagcagtggagaacctgaatgttctcgttcctgagctgctggacaagctgaag
gtggtcgagcagaagaagcccgtcaacaatgtgaccaccaacatcatgaggatcagagag
cttatagcccaagccaggagtgtggccaagaaagtccaagtgtccatgaagttcaacggt
cactcctcagtggaggttcatcctcccagcaacctggaagacctgaagacagtgacgtcc
atcagcttgttcatgagagtggatcctgacaaggatcccatagaggaccgtttcatctta
tacctgggagacagaaatggtaagaaggattacatgggactggctatcaagaatgacaac
ctggtgtacgtgtacaacctcgggggggaagatgttgagatcccattaggttccaagcct
gtcagccaatggcccgcagtcttcaactacatcaaagtagagaggctgggcagacatgga
aaagtcttcctgaccatccccagccagagctccacagacgagcagaagttcatccagaaa
ggcgaagctccaggcactgactcgctgtttgacatcgaccccaaagatatagtgttcttt
gttggcggcgtcccagcagatgtcaggcttccacctcccctgagtctagcaccttttgtg
ggctgcatcgagttgggttcactgaacaacgacgtgatcagtctatacaatttcaaagag
actcacaaaatggatgttgtcaagtcggcaccgtgctccaggtacaagttggcattttcc
cagagccgtattgctagctacctgtttgatggaacgggctacgcgctcatcaacaacatg
gagaggaggggcaaatttggtgttgtcaccagatttgatatttcagtgcgaactgtcgca
aacaatggtgtccttttcctcatggtcaatgaggaaaaattcttccttttagagataaag
aatggcttcctgcgcctaatgtacgactttggcttcagcaaagggcccgagcttttggag
aataacctacccaagatgcaaataaatgatgcacgataccatgaggtgtcagtgatctac
catcagtcaaagaaggttatcctactggtggacaagagccatgttaaatctatggagaat
ccaaaaaccacactgcctttctcagatatctacataggtggagctccctccagcattctc
aagtccaggcctgagctgtctgctgtcgtcaacctgaaaggctgtgtgaaaggtttccag
ttccagaaaaaagacttcaatctgctggaggagcctggcaccattggcatcagcagcggc
tgccccgaggagtcctttatgtcccgtaaagcctatttcactggagagagctacctggga
tccacagcaaagatttcaccctttgacaactttgagggaggactcaacttcagaacactg
cagcccggcggactcctgttctatctgagtgacgggtctgatgagttcagcatctccctg
gagaatggagccgtggtgatgaactgcagaggcacacgagttaaatcccacaagaaacaa
tacagcgacggaagaacacacttcttagtggccacagtaaacagtcagaaatatgcactg
gtggtggacgacaaagacaaacaggagaagaaacgtccgtcatctgccacacggtcctca
tcaggtactgctgtgaagacattctactatggagggtctccaagcagcagcttcaagaac
ttcacaggctgcatcagctacgcctacatcaacagacaggaccgggacattgagcctgag
gacttccagcgatacactgagaaggtgcagacctccctgcaggactgtccagtccagcgc
ccccctgctgctctgatgtcaaggcacagggaacactcatccagagccaaacagagccaa
tcacagaaggtcagcagcctcccactgggcctgatggaactgaagagtgatgaccaggag
ccatcagagctgaacatcaagccctgctacctctcctcaagtcccagagcagcccgccaa
gccttccactacggcggcatcgccaacagcaggcagcactacacagaccttcccaactcc
ttctctgagaggtcccacttttccttgtccctgaagacccactcatcctttggcctcatc
ttttatgtatcggatgtccaagaggacaacttcatggctctcttcctggcccacgggaag
ctcgtatacaccttcaacgtagcacaccaaagagtcaaaatcaagagcgaggagaagtac
agtgacggtgcatggcacaatgttatatttatccgtgacgggagtatggggcggttaata
attgatgggctcacggtgctggaagacaaagctcacggaagcaacgtctcctggcatgtc
agcagtcctctctatgtcggaggagttcctgcagagagagcccaaaagaatattcagaga
aactctgcatacagctttaccggctgtctgaagaaccttcagctggacgggcagtggctg
tcctctgtggccgagacttttggggtcactccgtgcttcgagggactctctgaggcggga
acatacttctcggaggaaggaggatatgtcgtgctggatgaaacatttgacctcgggcta
aggtttgagctagtgatggaggtgcgcccccgtgtggcatctggggtgctactgcacgtg
cgcacagcagagggctatttcactatgtacattcaccacggagaggtggtggctcttgtg
aacgacgggtctcatgagttcttcaccaaggtgtcaccattccagggtctgtgtgctggc
aactggcaccgcatcacagtgatccgggatgccaatgttgtccagcttgatgtggactct
gaggtcaaccatgtggtgggacctctgaatcccagctctacagataccaggaagccggtg
tttattggtggagctccagatctgccagagagcatcggcaccaggaaggcctgggtgggc
tgtatgaggaacctgaccatcaacaacagccgagtgagcttcagcaaagctgttgtggtc
agtggagcggtcagcgtcggaacctgtccagcagcataa
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