Etheostoma spectabile (orangethroat darter): 116706067
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Entry
116706067 CDS
T08457
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116706067
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116706067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116706067
Spliceosome [BR:
esp03041
]
Common components
Common spliceosomal components
SR proteins
116706067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
116706067
NCBI-ProteinID:
XP_032398548
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All DBs
Position
18:6896932..6906216
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AA seq
299 aa
AA seq
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MSGCRIFIGRLSPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGSGGSAGGRFSDRYGRGSQNSRSRNPPPMRTENRLIVE
NLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASCSDLKNAMDKLSGKEINGRK
IKLIEAARKRSRSRSRSESSSRSRSRSRGRSPSRSPRRSRSPAHKAHNRSRSPSVSPAGG
ASSPTSKSKELAKRSSKTSKSATPPSPPPAQRASISRSRSRSRSRSRSRSRSPSTDSQR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttgtcgtattttcattggccgtttgagcccatcggcgagagagaaggatgtg
gagaggttcttcaaaggatacggccgcattcgagacatcgacctaaagagaggatttggg
tttgtggagtttgatgaccccagagatgctgaagatgccgtttatgagcttgatggcaaa
gagttgtgcaatgaaagggtgaccattgaacacgcccgtgtacgtctgcgtggcggccgt
ggcagaggaagtggtggtagtgctggaggacgtttctctgatcgctatggcagaggttcc
cagaacagtcggagccgaaaccctcctccgatgcgcactgagaaccgcctaatagtggaa
aacttgtcttcacgtgttagctggcaggacctgaaagatttcatgagacaagctggagag
gtgacatttgccgacgcacatcgccccaagctcaacgaaggggtggttgagtttgcttct
tgcagcgacctgaaaaacgccatggacaaactgtctgggaaggaaatcaatggcaggaaa
atcaagctcattgaggcagccagaaagaggtcaagaagtcgttcccggtctgagagctcc
tctcggtcccgctcccgttctcgtggccgctctccatcccgctcccccagacgctcccgc
agccccgcccacaaggcccacaaccgttcccgctcccccagcgtgtcccctgccggcggc
gcttcctccccaacctccaaatcaaaggagctagctaaacggtcctccaagacgagcaaa
tctgccaccccgccctcccctcctcctgctcagagagcctcaatctcccgttctcgctcc
cgttcccgttctcgctcccgttcccgctcccgctcaccttctactgacagccagcgctaa
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