Etheostoma spectabile (orangethroat darter): 116706109
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Entry
116706109 CDS
T08457
Symbol
frem3
Name
(RefSeq) FRAS1-related extracellular matrix protein 3
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
116706109 (frem3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
Motif
Other DBs
NCBI-GeneID:
116706109
NCBI-ProteinID:
XP_032398648
LinkDB
All DBs
Position
2:9561852..9592270
Genome browser
AA seq
3143 aa
AA seq
DB search
MAGCLQSSPLCQKWELLRCLLVTLALSFGFASVDAEPFDLAHLYHHRSGPNEDNIIIANN
GIRVPFGRSVFLDPVNDLVTEVQPGDRCHITVLDNDPLAQKPGMLTPKKFPCSFGPDEVK
YTHFGSRSPSKDRVKLQLRYDSQTESVIIPFMLEVEVVFQQLEILTRNMPLNVEKLNGDS
NPIEKKGLEFSFEDGVTQCKIATLVGAGGLPRYGTLLNNPSNGQMVDCDEFLKQGIRYKH
TAKTNSPNRDYIPMMAELQDNEGNTIMQEHFQMMVRIREGAENTAPKPSFVAMMMMEVDQ
FVMTAITSDMLAAEDVESDPDDLIFNITTPLSPQQGYIISTDDQNLPITSFYQRDIKDLK
IAYKPPSEDSEVERIFQLEFEIVDTDGAVSDTFAFMIVVKPMNTLAPVATKNTGQLLFEG
QSRALSSYQNLEISDEDNLEDVRITVVDGLKHGDLTVLGARRKFFTPADLDAGIVLYQHD
GSDTYSDNIIFRMTDGSNEVEFLFPITIAPTDDEPPIINANTGLVLFKNEVMQISPFILS
ASDIDSEDSTIKFIMEAPYSTVGELLLRQVEPPSDPSLWKFSETDEMFEQVVIEWFQQDI
LDGKLFYRHIGPHSTTTVIDQFVFRVQDDNDPPNQSGEHVFTTKIHPVDDLAPVIFPGTT
LHMTVQEYELTHFKKKFLCYSDLDSDDRDLKYTIIKPPTDTDENNPVPLGDIVLTESPDT
VITEFTQAQVNHHKVAYKPPDQELGITPKVAQFTFIVEDTAGNTLDGLFTIFLQPVDNKP
PLIINTGFTVMERSTYVITRKELHATDTDTDDENIIFTVTQIPLFGQLQYLGINMANSET
FVLDDIENGRLTYIHNGEESLSDVIKIDVSDGFHEVPITIKITIEPVDDETPTIMLPDGL
LGASIDVLENGATEITSNVIQGRDEDTDDLILTFIVEEPPRLGEILVNGAPAERFTQEDI
INGAVVYAHTSGEIGTVKKHDSFNLTLSDLSEQWVVGGNKVQGVTVHVTILPVDSIPPVV
SVGEQFVGIEGEKNVITMDHIQAEDIDTTNDDILCTIIVQPTSGYVENISPASGSEKSRA
GTAITAFSIKDIALGHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFLPIVIIPANDE
KPEIFIREFVVMEGMSLVIDTPILNAIDADIPGDELHFEIIKKPKHGTIVQQLSTGTVPV
EKFNLEQIQEASNIVYEHDDSEIKEDSFEIRLSDGKHTVEKTVLIMVIPVDDETPRMAIN
DGLDVEIGETKVISNSVLKATDLDSEDKELTYVVQYGPGQGYLQHISKYGDVLGNITLGM
NFTQDEIDKQLIQYVHTGQEGIRDLLKFDVTDGINPLIDRYFYINIGSIDMVFPDVINKG
VTLKEGGRVTLTTDLLSTSDINSPDEFLGFSITRAPSRGHLESTDHPGVPISTFTQLQLA
GNKIYYIHTSDDEMKMDSFEFEVTDGYNPVFRTFRVSITDVDNKKPVLTISKLVVEEGES
KLITPFELTAEDRDTPDTLLRFIVTQVPVHGQLLFNNTKPVTTFSKQDLNENLISYKHDG
TESTEDSFSFTVTDGTHSDFYVFPNTVYETRKPQMMTIHINTVDNGVPQIVVNKAAASLK
VLQTNHLGFVITSKALRAEDRDSSQRVLKYIVSEAPLHGFIMNTALGNDSINTFTQADID
DMKICYVLLDGSNATSDIFYFTVEDKGGNKLKPQPFRLNWAWISLEREYYLVDEDAKFLE
VTLKRRGYLGETSFVSIATKDGTAEKDKDFRGKAQKQVQFNPGQTMATWRVKIFTDQEFE
TSETFKIQLSDPVMAVLEFPDTATVEIVDPGDESTVYIPQAEFKIEEDAGELLVPVRRSG
DASQELMVVCFTQQATATGTIPSTVLSYSDYITRPEDHNSVLRFDKDEREKLCRIIIIDD
SLYEEEESFNVSLSMPMGGQVGANFPTAKITILADSDDEPSLYFGEPEYVVDESSGYVEV
KVWRTGTDLSKTATVTVRSRKSEPVSAEAGLDYVGISRNLDFAPGVTMQTFRVTILDDLG
QPELEGPETFDLMLRMPMNAVLGEPSKTTITINDTVTDVPKVQFKEGNYKVDESDGEITA
IVYRSGDVSLRSTVRCYTRQGSAQVMMDYSERPNTDASTITFLPGETEKPCAVSLMDDSI
HEDDEEFRLVLGTPKSKSPYGASIGEQKEALVTVTDGKDKPIIRFSEIKYSVREPQVKGD
VAIVKIPILRVGDTSKVSVVRVHTKDGSATSGEDYNPLSEDVEFKEGETEHFVEIDILYD
GQREMREAFTVHMKPDDNMVAEIQMNKAIVYIEEMDSVADVTFPAVPQVVSLLMYDDTAK
SKDKPHPPNGYPVVCVTACNPKYHDFDKTGSICSAENINDTLTQYRWLVSAPTGSDGVTS
PMREVDTNTFFTNTKSITLDSIYFQTGSRVQCAARAFNANGDAGLELSSPIAVISKEEGM
CQPRIPGTVGAEPFSAKIRYTGPDDPDFPNLMKLTVNMPHMDGMLPVISTRPLSNFELTL
SPDGTRVGNHRCSNLLDFNEIQTGHGFITDATKNPEIIGETSPYQYSPVMRSANSLRFYR
NLNLEACLWEFTTYYDMSELLNDCGGSIGTDGQVLNLVQSYVTLRVPLFVSYVFHSPVAV
GGWQHFDLQSELKLTFVYDTAILWQDGIGSPPEAELQGAMYPTSMRINEEGRLVVNFKTE
ARFRGQFVMSHSGTSVSSMVMCADHPGLTFTLALVRTEPTYNQPMQQWSFVSDFAVRDYS
GTYTVKLIACIASPNGEFSIPPVCHPREPLTFDMDIRFQQVSDPVAAEFSLNTQMFLLSK
KELWLSDGSMGFGEGTDAAFSDGSIIYGRVMVDPVQNLGDSFSCSIEKVFLCTGADGYVP
KYNPTNKEYGCLADAPSLLYRFKILDKAQPETQASVFGDVAFKATLAQDTPGGLPLVRQP
GSDGFSLSSSPLFQVAAGREWFIHTIYTVRSRENANRNIGKRSLEYLHHSLSSVEQPETS
DMATHRHRRAAPALSDLGVAQDIGVENNRGTNIQHIALDRSDRMVVSQRQPWSPNRDPLL
DRPLLESSGRELADTSTVPMLVGLAGLILLICLIATIVILLLWCKKREKKTQFPPYTTSS
SSAYNGYSQDPAGMWSSSDNSEV
NT seq
9432 nt
NT seq
+upstream
nt +downstream
nt
atggctggttgtctgcaaagttccccactttgtcaaaagtgggaacttttaagatgcctg
cttgtgacacttgctcttagcttcggttttgcttcagtagatgcagagccgtttgaccta
gctcacctttatcaccaccgatctggacctaatgaagacaacatcatcattgctaacaac
gggatcagagttccttttgggaggtctgtgtttctggaccctgtgaatgaccttgtaaca
gaagtgcagcctggtgaccgctgccacattacagttttggacaatgacccactggctcag
aaacctgggatgctgactcctaaaaagtttccctgttcatttggaccagatgaagtgaaa
tacactcattttggatctcggagccccagcaaggatcgtgtgaagctgcagcttcgttat
gactcccagacggagtccgttatcatccctttcatgctggaagtggaggtggttttccag
cagcttgagattttgaccaggaatatgccccttaatgttgaaaagctaaatggtgacagc
aaccctattgaaaaaaaaggtctggagttttcctttgaggacggtgtaacacagtgtaag
atcgccactctggtcggcgctggaggtcttcccaggtatggcactctattgaataacccc
tcaaatggccaaatggttgactgtgatgagtttctgaaacagggtattcgctacaagcac
acagctaaaaccaactcacctaacagagactatattccaatgatggcagagctgcaggat
aatgaaggcaacaccataatgcaagagcatttccaaatgatggttagaatcagagagggt
gcagagaacacagctcctaaacccagctttgtagccatgatgatgatggaggttgatcag
tttgtgatgacagctattacaagtgacatgctggctgctgaagatgttgaatcagatcca
gatgatttaatcttcaacattactacaccgcttagccctcagcagggctatatcatcagc
acagatgatcagaatctgccaatcacctctttctatcagagagacatcaaagatcttaaa
atagcttataagccaccctcagaggactcagaagtagagaggattttccagctagagttt
gaaattgtagacactgatggggctgtgtctgatacatttgcttttatgattgtggtgaag
cctatgaatactttggctcctgtagcgaccaaaaatacagggcagctattgtttgaaggg
cagtctcgagctttatccagttaccagaatttagagattagcgatgaagataacttggaa
gatgtgagaataactgttgttgatggtttaaagcatggagacctgaccgtgctcggcgct
cgcaggaaattctttacacctgccgatctagacgccggaattgtgttgtaccagcatgac
ggcagcgatacctatagtgacaacattatttttagaatgactgatggcagtaatgaagtg
gagtttttgttccctatcactattgctcccactgatgatgagccgcctattatcaatgct
aacactgggctggtgctattcaagaatgaagtcatgcagatctctcccttcatcttgagt
gcctcagatattgattcagaagactccaccattaagtttatcatggaagcaccctactca
actgtgggtgagctcctgctaaggcaagtggagcctccatctgacccgtctctctggaag
ttcagtgagacagatgagatgtttgagcaggtggtaatagaatggtttcagcaggatatt
cttgacggaaagcttttctaccgtcacatcggaccccatagcaccaccactgtgattgat
cagtttgtgtttcgggtccaagatgataatgaccctcctaatcaatctggcgaacacgtc
tttaccaccaaaattcatcctgttgatgacctcgccccagtaatctttccaggcaccacc
cttcacatgacagtccaggagtatgagctaacccacttcaaaaagaaattcttgtgttat
agtgatctagattcagatgatagggacctgaagtacaccattattaagcccccaactgac
acagatgagaacaatccagtccccttaggtgatatcgtactgactgaaagcccagacact
gtaattactgaattcacacaggcccaggttaatcaccacaaagtagcttacaagcctcca
gaccaggagctgggaatcactccaaaagtggctcagttcacattcattgtggaagacact
gctggtaacactctagatggactattcaccattttcctacagccagtggacaacaaaccc
ccacttatcatcaacacagggttcactgttatggaaagaagtacctatgtcatcactagg
aaagagctgcatgccacagacacggataccgatgatgaaaatattatcttcactgtgacc
cagatccctctgtttgggcagctgcagtatttggggatcaacatggcaaatagcgaaaca
ttcgtacttgacgacattgaaaatggtcgccttacttacattcacaatggagaggaatca
cttagtgacgtgataaagattgatgtcagtgacggttttcatgaggtacccatcaccatt
aagatcacaatcgagccggttgatgacgagacccctacaattatgctcccagacggtctg
ctcggagcatcaatcgatgtactggagaatggagccacagagattacaagtaatgtcatt
cagggccgtgatgaagacacagatgacctcatcctcactttcattgttgaagagcctccc
aggctgggtgaaatcctggttaatggtgctcctgctgaaagattcacccaagaagacatc
atcaatggggcagtggtgtatgctcacacatctggtgaaattggaacggtcaaaaaacat
gattctttcaaccttactctgtctgatttgtcagagcagtgggtcgttggcggtaacaag
gtccaaggtgtgacagttcatgttaccatccttcctgttgacagcattccacctgttgtc
agtgttggagagcagtttgttggaatcgaaggggagaagaatgtcataactatggaccac
atccaagccgaagatattgacactaccaatgacgatatcctgtgcaccatcattgtccaa
ccaacatctggttatgtggagaacatctccccagcctcaggctctgaaaaatccagggca
gggacagctattactgcctttagcattaaagacattgcactcggtcacatatactatgtc
caaagcattcacaaaggggttgaacctgtggaagatcgtttcaccttccgttgctcagat
ggtattaacttctctgaacgccacttcttacctatagtcatcattccagccaatgatgag
aagccggagattttcatccgtgagtttgtggtaatggagggcatgagtctggtcattgac
acaccaattctgaacgccattgatgctgacatccctggggatgagctgcactttgagatc
atcaaaaaacctaaacacggtacaatagttcagcagctcagcactggcactgtccctgta
gaaaaattcaacctggaacagatccaagaggcatccaacattgtctatgaacacgatgac
tcagagatcaaagaggacagctttgaaatcagactctcagatgggaaacatacagtggaa
aaaacagttcttatcatggttattcctgttgacgatgaaacaccaaggatggctataaat
gatggcctagatgttgagattggagagacaaaagtcattagcaacagtgttttgaaggcc
actgatcttgattctgaagacaaagagctaacatatgttgtgcaatacggcccaggtcaa
ggctaccttcagcatatcagcaagtatggtgatgttttaggtaatatcaccctcgggatg
aacttcacacaggacgaaatcgacaaacagctcatccaatatgtacacacaggccaggag
ggaatccgtgacctgctgaagtttgatgtcactgatggcatcaatccccttattgaccgt
tacttttacattaacattggaagcattgacatggtctttccagatgtaatcaacaaaggt
gtgactctaaaagaaggagggagagtaactcttactactgacctcctcagcaccagtgac
attaacagtcctgatgaattccttggctttagcatcacaagagcacctagtagaggccac
ttagagagcactgaccacccaggtgtacccatttccaccttcacccaactgcagcttgct
ggcaacaagatctactacatccacacctctgatgatgagatgaaaatggacagctttgag
tttgaggtgacagacggttacaatcctgtcttccgtaccttcagagtgtccatcactgat
gtagataataagaaacccgtcttgacaataagcaaactggttgtggaggagggagaaagc
aagctcatcacgccatttgagttgacagctgaagatcgggacaccccagacaccctattg
cgattcatagtcacccaggtgccagtacatgggcagctgcttttcaacaataccaaacca
gtcacaaccttttccaagcaagacttaaacgagaaccttatcagctataagcatgatggc
actgagtccaccgaagacagcttctcctttactgtcacagacggcactcattctgatttt
tatgtctttcctaacactgtgtatgagacacgcaagccccagatgatgaccattcacatc
aacactgtggacaatggtgtgccccagattgtggttaacaaagctgctgcctcattgaag
gtcctccagacaaaccacctgggcttcgtgatcaccagtaaggcccttcgagcagaggat
cgtgacagttcccagagggtcctgaaatacattgtgtctgaggctcctctgcatgggttt
atcatgaacactgccctgggcaacgacagcatcaataccttcacacaagctgatattgat
gacatgaagatctgttatgtgctgttggatgggagcaacgccacaagtgatatcttctac
ttcacagttgaagacaaaggtggaaacaaactaaagcctcagccattccggctcaactgg
gcttggatatctctggaaagggaatattatttagtggatgaggacgccaaattcctggag
gtgacactcaaacgcagaggctacctgggagaaacctccttcgtcagtattgccaccaag
gatggaacagctgagaaggacaaagacttccgtggcaaagcccagaagcaggtccagttc
aaccctggccagactatggcaacctggagggtgaaaatcttcacagaccaggagtttgag
acctcggagactttcaagatacaactgtcagacccggtcatggctgtgctggagttccct
gacaccgcaacagtcgagattgtggatcctggagatgaatccactgtctacattcctcaa
gcagagttcaagattgaggaggacgctggagagcttttagtgccggtgcggcgctcggga
gatgccagccaggaactcatggtcgtttgtttcactcagcaagccaccgccactggcacc
atacccagcactgtgctgtcctactcagactatatcacccgacctgaggaccacaacagt
gtgctgcgatttgacaaggacgagcgagagaaactctgtcgcatcatcatcattgatgac
tccctgtatgaggaagaagagagctttaacgtcagcctcagcatgcctatgggcggccag
gtgggcgccaacttccctaccgccaagatcaccatcttggcagacagcgatgatgagccc
tcgctgtatttcggggaacctgagtatgttgtggatgaaagttcaggctacgttgaggtc
aaggtctggagaacagggaccgacctctctaagacggccactgtaactgtgcgctccagg
aagagtgagcctgtctctgcagaagctggactggactatgttggcattagtcgcaactta
gactttgctcctggagtgacaatgcagacattcagagtgaccatcctggatgatctgggt
cagccggagctggaggggccggagaccttcgacctcatgttacggatgcccatgaatgct
gtgctgggagaaccgagcaagaccaccatcaccattaatgatacagtcactgacgtgcca
aaggttcagtttaaggaaggaaactacaaggtggatgagtcggatggggagataactgcc
atagtgtaccgcagtggagacgtaagcctccggtccacagtgcgctgttacactcgccaa
ggctctgcccaagtcatgatggactacagtgaaagacccaatactgacgcatcaaccata
actttcctaccaggtgaaactgagaagccgtgtgcggtcagcctgatggacgattccatc
catgaagacgatgaggagttccgtctcgtcctgggaactcccaagagcaagtctccttat
ggagcttctatcggggagcagaaggaagcgctggtcacagtcacagacgggaaagacaag
cccatcatccgtttctctgagatcaaatacagtgtacgtgaacctcaggtcaaaggtgac
gtggctatagtgaagattcccatcctgcgcgtcggagacacctcaaaggtctcagtggtg
agagtgcacaccaaggacggctccgcaacctccggagaagactacaacccgctgtcagaa
gatgttgagttcaaagagggtgagacggaacactttgtggagattgatatcctgtatgac
ggtcagagagagatgagagaggccttcactgtacacatgaagcctgatgacaacatggtg
gctgaaatacagatgaacaaggccattgtgtacattgaggagatggacagtgtggcagat
gttaccttccctgccgtgccccaggtggtttccctgctaatgtatgatgacacagctaaa
tccaaagacaagccccacccgccgaatggatacccggttgtgtgcgtgacggcttgcaac
cctaagtaccacgactttgacaaaacgggttcaatctgctctgcggagaacatcaacgac
actctgactcagtatcgctggctagtcagcgcccccaccgggtcagatggagtgaccagc
cccatgagggaggtggacactaatactttcttcaccaacaccaagtccatcactttggat
tcaatctattttcagaccggttcaagggttcaatgtgctgcaagggccttcaacgccaat
ggagatgccggtctggagctgtccagtcccattgctgtgatcagcaaggaggagggtatg
tgtcagccccgtatcccaggcactgttggagctgaacctttctctgctaagatccgctac
accggtccagatgacccagacttccccaacctcatgaagctgactgtcaacatgcctcac
atggatggtatgttaccagtgatctccacaagacctctgtccaactttgagctcaccctg
agcccagacggcacacgtgtaggcaaccatcgctgctccaacttgctggatttcaatgag
atccaaacaggccacggcttcatcacagatgctacaaagaaccctgaaatcattggcgag
acatcaccctaccagtatagcccggtcatgcgctcagccaactcactgcgcttctacagg
aacctcaacttggaggcctgcctctgggagttcaccacttactacgacatgtcagagctg
ctgaatgactgtggcggctccataggcaccgatggacaggtgctgaacctggtccagtcc
tacgtcaccctgcgtgttcctctgtttgtgtcctacgtcttccactctccagtggctgtg
ggaggctggcagcacttcgacctgcagtcagagctcaaactcacatttgtgtacgatacc
gctattctgtggcaggacggcatcggcagcccacctgaggctgagctacaaggcgccatg
tacccaaccagtatgcgtataaatgaggagggacgtctggtggtcaacttcaagacagag
gctcgcttcaggggacagtttgttatgtctcattcaggaaccagcgtgtcatccatggtg
atgtgtgccgaccaccccgggctgacattcaccctcgccctggtcaggaccgagcccact
tacaaccagcccatgcagcagtggagttttgtctcagactttgctgtgcgagactactct
gggacctacacagtgaagttgatcgcctgcattgcatcacctaatggggagtttagcatc
cctcctgtctgccacccaagagagccacttacgtttgacatggacattcgcttccagcag
gtgagtgacccagttgcagctgagtttagcctcaacactcagatgttcctgctgtccaag
aaagagttgtggttgtctgacggctccatgggctttggagaaggaacggatgctgctttt
tcagatggttccatcatctacggtcgtgtaatggtggaccctgtccagaacctcggtgac
tcgttctcctgtagcattgagaaagtcttcctctgcactggagcagatggctacgttccc
aagtataacccaaccaacaaggagtacggctgcctggcagacgctccttctctgctttac
agattcaagatcctggacaaagcccagccagagactcaagcttcagtatttggtgatgtt
gcttttaaggccacactggctcaagacacacctggaggtctgcctttggtcagacaacca
ggatcagatggcttctcactctcctcatctccacttttccaggtggctgccggtcgggag
tggttcatccacactatttacacagtccgctccagagaaaatgccaaccgcaacattggc
aaacgcagtttggagtacctgcatcacagtctgtcctctgttgagcagcccgagacctcc
gacatggccacccaccgccaccgccgtgccgcccctgctctttctgaccttggtgtggcc
caggacatcggtgtagaaaacaaccggggcaccaacatccagcacatcgctctagaccga
tcagaccgcatggtggtcagccagcgccagccctggtccccaaaccgtgaccccctcctg
gaccgccccctactggaaagttctggcagagaactggctgacacctccaccgtacccatg
ttagtgggcctcgcaggtctgatccttctcatctgcctcattgccaccattgtcattctg
ctgctgtggtgcaagaagagggaaaagaagacccagttccctccttacaccacctcctct
tcttctgcctacaatggctacagccaagacccagcgggcatgtggagcagctcagacaac
tctgaagtctag
DBGET
integrated database retrieval system
