Etheostoma spectabile (orangethroat darter): 116706342
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Entry
116706342 CDS
T08457
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116706342 (taf1a)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116706342 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
P34-Arc
COG4_N
Motif
Other DBs
NCBI-GeneID:
116706342
NCBI-ProteinID:
XP_032398999
LinkDB
All DBs
Position
18:8565278..8578518
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AA seq
424 aa
AA seq
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MDDLQRELVPLEDLDDDDSSEGNSSKGSRKSKLPLLNLMCAQTPNETGFHQSTRVCLEQI
REALLHHRWQEAAEYMACYPQMLEDPTNGTGQPYKELIWRISTEILHHHPNSKMEDYNNI
YERMKHSGVRHYLMICLEHSFHLLLNGHIEDAKRQLSVAESWRHGKESAAQYQRIKLIHA
YRSLLDYIIWCDKKFTHSNTEYPISGDNQDMHNYFRQASVNLKEILKSPGIWDPFILSYV
EMLEFYEDHEEALRVLNDYAYDSTFPPNPNAHVYLYQYLRRHDTSERKLMKVLKILHVLV
PSHELMLEYSSLLLQSEKRSNIQKALGVVLEMLDFACWRSNLDAWKRLKSIIQKLQLEDN
WKDVVSGQMAARKDWWPALHFTSFHASKDSEENPELMEVKAPLTKILCPDLMLKYTASQV
TSGE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttgcaaagagagctggtgcctcttgaagacttggatgatgacgattcctcg
gaaggcaactcttcaaaaggatcgagaaaatcaaagctccctctgcttaatcttatgtgt
gcccagactccaaatgaaactgggtttcaccaaagtaccagagtctgtctggagcagatc
agagaagccctgctgcatcacagatggcaagaggcagcagaatatatggcatgttaccca
caaatgttagaagacccaaccaatggcacaggtcagccgtataaagagcttatctggaga
atcagcaccgagatccttcaccatcaccccaactcaaagatggaggactacaacaacatc
tatgaacgaatgaaacactcaggagttagacattacctgatgatctgtctggaacattca
ttccacctgctgcttaatggtcacatcgaggatgcaaagcgtcagctgtctgttgctgaa
agttggaggcatgggaaggagtcagcagctcagtatcagaggataaaactgatccatgcc
tacaggagtttactagattatatcatctggtgtgacaaaaagttcacacactccaacact
gagtatcccatctctggtgacaaccaagacatgcacaactacttcagacaggcctctgtg
aatctgaaggagattttgaaaagtcctggcatctgggatcccttcatactgagttacgtt
gagatgctggagttctatgaggaccacgaggaggctttgagagtccttaatgattatgcg
tatgacagcactttcccacctaatcccaatgcgcatgtctatctgtaccagtacttaagg
aggcacgatacttcagagaggaaactgatgaaagtattgaagatcctccatgtactagtc
ccaagccatgagttgatgttggagtatagctctcttctgcttcagtcagagaaaagaagt
aacatccagaaagctttaggagtcgttttggaaatgctggactttgcctgctggaggagc
aacctggacgcgtggaagcgtctgaagtccattattcaaaaactacagttagaagacaac
tggaaggatgttgtctctggacaaatggctgcaagaaaagactggtggcctgcgctgcac
ttcacaagcttccacgccagtaaagactccgaggagaacccagagctcatggaagtgaag
gcaccactgacaaaaatcctttgcccggacctaatgctcaagtacacagcctcacaggta
accagcggagagtga
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