Etheostoma spectabile (orangethroat darter): 116706480
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Entry
116706480 CDS
T08457
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1 isoform X1
KO
K06063
SNW domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
esp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116706480 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116706480 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116706480 (snw1)
Spliceosome [BR:
esp03041
]
Complex B
Other components
Prp19-related factors
116706480 (snw1)
Complex C
116706480 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
116706480
NCBI-ProteinID:
XP_032399242
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All DBs
Position
18:23169335..23180076
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AA seq
537 aa
AA seq
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MSLASFLPAPTQLSQDQLESEERLRAQTSYSTALVSSRREPPPYGHRKAWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQGQGKDKVIFSKYTDLL
PKEVLNEDTPELQKPDEEAVKELTEKTRSALDKAVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDRRAGIKSHGDKAGGEDTEVRERDEIRH
DRRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGVPNPRSASEAQYDQRLFNQSKG
MDSGFAGGEDETYNVYDQPFRGSRDMASNIYRPSKNIEKDAYTDDFDTLMHNNRFVPDKE
FSGADHGQRREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSTSGRSKDDYHDKKRRKE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcgagctttttaccggccccgacccagctgtctcaggaccagctggagtca
gaagagaggctccgggcccaaacgtcctactcgaccgccctggtttcgtcccgcagggag
ccccctccttatggacacagaaaagcctgggtgcctcgctcgcttgaggactttggagat
ggaggtgcttttccagagatccacgtggcccagtttcctctggagatgggtaggaagaag
aagacatccaatgccctggcggtgcaggtggatgcagaaggaaagatcaaatatgacgcc
atcgcccgacagggacagggcaaggataaggtgatcttcagtaagtacacagaccttctt
ccaaaggaagttctgaatgaagacacgccagaactacagaagcctgatgaggaggctgta
aaagagctgacagagaagacccgcagtgccctggacaaggcggtgtctcaaaagattgct
gctgccatgcctgtaagagctgcagacaaacaagctcctgcacagtacatcagatacacc
ccgtcccagcagggagtggcttttaactccggggccaaacagagggtgatccgcatggtg
gaaatgcagaaagatccgatggaacctccacgtttcaagatcaacaagaagattcctcga
ggaccaccttctcccccagcccctgtcatgcattccccaagcagaaagatgacagtcaag
gagcagcaggagtggaagattcctccatgcatctccaactggaaaaacgctaagggctac
accattcctcttgacaaacgtctggctgctgatggtagggggctccaaaccgttcacatc
aatgaaaactttgccaagctggctgaggcgctttacattgctgaccgaaaggccagagag
gcagtggagatgagagcccaggttgagaagaagatggcccagaaggagaaggaaaagaag
gaggagaaactgagggaactggcccaaatggctcgagaccgcagggcagggatcaaaagt
cacggggacaaagcaggtggcgaggacactgaggtcagggagcgtgacgagatccgccat
gacagaaggaaagagagacagcacgacaggaacatttccagggctgctcctgataagagg
tcgaagctgcagagagatcaggacagggacatcagcgagctcatcgctctgggcgtgccc
aaccctcgttctgccagtgaggcccagtacgaccagcgactcttcaatcagagcaagggt
atggatagtggttttgccggtggtgaggatgagacgtacaacgtgtacgaccagccgttc
cgcggcagcagagacatggcttcaaacatctaccggcccagcaagaatatagagaaggac
gcctacacagatgacttcgacacactcatgcacaacaacaggtttgttccagacaaagag
ttctcaggtgccgaccacgggcagaggcgggaaggtccagtccagtttgaggaggatccc
ttcggactggacaagttcttggaggaggccaagcagcacggcggctccaagaggccgtcc
accagcggccgctcaaaggacgactaccacgacaagaaacgcaggaaggagtga
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