Etheostoma spectabile (orangethroat darter): 116706772
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Entry
116706772 CDS
T08457
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116706772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116706772
03021 Transcription machinery [BR:
esp03021
]
116706772
03036 Chromosome and associated proteins [BR:
esp03036
]
116706772
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
ARID
116706772
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116706772
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116706772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116706772
NCBI-ProteinID:
XP_032399666
LinkDB
All DBs
Position
18:5516687..5544752
Genome browser
AA seq
1851 aa
AA seq
DB search
MDQVHNSHEGFNNNNNNSPFNNHYPNYRPGYGNSGYAGIMSPSRQGNNLMGPGTKAAVIA
TNSPTGSGGFQQRFPGQQCPQQQHPSGATPTLNQLLTSPSPMMRGYGSGYPDYNVNSSQQ
QQLTLAKDIQYGSATHGWGQQQRSHPTMSPGNNGQGGGRPQVPAMDPMGMKRSQLYGMSN
NPYSQQQGASYSGQPYSAPSPHRYPMGMPSRGQMGMGGMQYPQQQMGSQYSQQQQSMGSY
SQPGQPPYFSPPQQQPAAPSQPPYMQPRPLPQQEVPQEAYGGRGQSAAMTPGKPNHEEMS
LSQQERPSSLPDLSGSIDDLPTGTEAAVTSGASGSGSAQGDQGTPARSPFSPHVSPRLPP
PARSGPSPSPSLSPAGSSNQSRSGPMSPATSGPGSQLAPQLSGPGSDVGLHPSHSAMTQD
RGFPASMQRSTLGHQFDPQQSAPPMSPHTAPGGPMHHGSNQQGASYGLYGPPGNYPRPPH
YGGTPSTNYSGPGPGLANSLGLNASSPMHGQGPSTPAGRGPGPGAGGRSYPAGGSTMAPT
SPGMPQPAGQGMGPPGPNASSKQPEVGPNAGPSANANAAQSRQGSYLGMAPMGGMGGGLY
SQQTSSNSGRMTPQGPPYNATSSGAVMMMPADLTGLGELGYEPPKTKPPVSPSTAGLSLC
PGEDADSISSSAWAKTTTSSKQNVATMTNEKITRLYEMGGEPERKLWVDRFLSFMEERGT
PVPNLPAVGRKPLDLCRLYLAVREIGGLAMVNKNKKWRELSSLLSVGTSSSSASSLKKQY
IQYLFAYECKVERGEEPPPEAPGCARDAKKPPSLQAKIQPPSPANSGSLQGPNITQSEAP
GNLKPPTPAFTPHSHMGPQPSTPHSHMGPQPSTHHSHMGPQTANRNMAGVSVLDPFSEGS
DPAFHNKRGPGPRGAPYQQGGGPTDPSMRMQYNANKDPYGGPRKGPGPGEAFGPGQMPSG
AMQDGYPHGPPSGPLTGMDPRPQYPYGPGYERRPDHVLGPDGGMAPPGGQSSVAPSGGEA
GMYTANRYTQQRHGHDGYGQQYPHGMAYSSHQPLYPPQQGYKRAMEGIYPPAKRHEGEGF
ATQQFGSQQPDLFGPYGGGSDSGGGYLGSEQRPVQGQYPYPYTRERQHGMMGPGEGPQSN
MWPPRTDYAYSRQGQGPAYPNVSRGDEQEGRAPQDSQWPPGHPGQCQTPYPHSASRSMSP
LPSRQPPSSFQALPTAPNHVSRSHSPSSFPRPPGGSLSPNSAPYLPSIKKPGPPAPQGPP
IIHGELSFPPGSVEATVPKLKPRRRLTAKDTGTPEAWRVMMSLKSGLLAESTWALDAINI
LLYDNSTVGSFSLSQLPGFLELIVEFFRRCLIKIFGILVEYEVGAEGQRTLLGPLRDPPK
EKEEEVTETPSDGQTAEVQKTPKTEEGTLPAAADIEKEEAVVKEEVQVEPRPQQASKFDK
LPILVEEEGEEWEEMERRWAELSQPNGFISGLLHWKAGGGDSTAHIQTGDTVAVERGRGD
EGGGEVDEERGKETTPETQRGYLWEGGRPSPLSELEDEPRCWDEAPLSTAESWQDSLARR
CLCVSNIVRGLSFVPGNDAELSRHAGLVLILGRLVLLHHQHTPRKRTAPGLQQAEEAGLA
CSRDEWRWDCLAALRENTLVTLANIAGQLDLSLYPESICLPLLDGLLHWMVCPSAAAHDP
PSASALSPHRLALECLCKLSIQDGNVDLLLATPPFSRQQTLFAALLRLVGERRSQVCREM
AVALLANLAQGDAAAARAVALQKGSVGTLIGFLEDGVAAAQFHQSAHAGEPPSVNMMCRA
ARALLAMARADDNRTQFVLHESRLLDVSLSAALDASVTAVMCEVLFKIGRS
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggttcacaactcccacgaaggcttcaacaacaacaacaacaacagcccattt
aataaccactacccaaactatagacccggctatgggaatagtggatacgcgggaataatg
agtccctcacgccaggggaataacctgatgggcccgggaaccaaagcggctgtgattgct
acgaactccccgactggaagcggagggtttcagcaacggtttcccggacaacagtgtccg
cagcaacagcacccctccggagctacaccgactttaaaccagttattgacgtctcccagc
ccgatgatgcgcggttatggaagtggatatcctgactataacgttaattcttcacaacaa
cagcagctaacgttagctaaagacattcagtacggctcggctactcacggctggggacaa
caacaaagaagtcacccgaccatgagcccgggaaacaacgggcagggcggcggacgacct
caggtgccggcgatggatccgatgggaatgaagcgctcgcagctttacggcatgagcaac
aacccgtactcccagcagcagggtgcgtcgtactccggccagccctacagtgctccgtcc
ccccacagatacccgatggggatgcccagcagggggcagatggggatgggagggatgcag
taccctcagcagcagatgggttctcagtacagccaacagcaacagagcatgggtagttac
tctcagccaggtcagcctccgtacttcagccctccacagcagcagcccgctgccccgagc
cagccgccgtacatgcagccacgcccactgccacaacaggaggttcctcaggaggcgtac
ggggggcggggccagtctgccgctatgactcctgggaaaccgaaccatgaggagatgagt
ctgagccaacaggagaggccgtccagcctgccggatttatccggctccatcgatgacttg
cccacgggcacagaagcagcggtgacttcaggggcgtcgggctccggcagcgctcagggc
gaccaggggaccccggcccgttctcctttctccccccacgtctcccctcgcctccccccg
cccgctcgctccgggccctccccttcgccctcgctgtccccagccggctcgagcaaccaa
tcacgatcaggaccgatgtcccccgccaccagcggaccaggctctcagttggcccctcag
ctctctggtcctggatcagacgttggtcttcatccctcccattctgccatgacccaggac
agaggtttccctgcctccatgcagcgaagcactttggggcatcagtttgacccccagcag
tcggcaccacccatgtcccctcacaccgcgccgggggggcccatgcaccatggctccaac
cagcagggggcctcctacggcctctacggccccccaggtaactaccctcgacccccccac
tatgggggaacccccagtaccaactacagcggcccgggccccggcttagccaacagcctg
ggtttgaacgccagtagtcccatgcacggccagggcccgtctactccagcaggtcgcggc
ccagggcccggggccggggggcggtcttaccccgccggaggaagcaccatggcccctact
tcccccggcatgccacagcctgccgggcagggcatggggcccccagggcccaacgccagc
agcaaacagcctgaggtcggccctaacgccgggcctagtgccaatgccaacgccgcccag
agcaggcagggcagctacctgggcatggccccgatgggaggaatggggggaggcctgtac
agccagcaaaccagcagcaactctgggaggatgactccgcagggacccccctacaacgct
acatcctcaggtgccgtgatgatgatgccagcagacctgacaggactgggcgagctcggc
tacgaaccgcccaaaaccaagccccccgtgtcccccagcaccgctggtctgtccttgtgt
cccggagaagacgctgatagcattagcagctccgcctgggccaagacgacaaccagttcc
aagcagaacgtggccaccatgaccaacgagaagatcacccgtctgtacgagatgggcggc
gagccggagaggaagctgtgggtcgaccgcttcctgtccttcatggaggagcgggggacg
cccgtcccaaacctgcccgccgtggggaggaaacctctggacctctgcagactctacctg
gctgtccgagagatcggaggtctcgccatggtgaataaaaataagaagtggagagagttg
tcgtctctgttgagcgtggggacgtccagcagctcggccagctccctgaagaagcagtac
atccagtatctgttcgcctacgagtgtaaggtagagcgaggggaggagcctccgcccgag
gcaccgggctgcgccagagacgccaagaaacctccgtcgctgcaggccaagatccagccc
ccttcaccagccaactcgggctccctgcagggccccaacatcactcagtccgaggcccct
ggaaacctgaagcccccgacccctgcctttaccccgcacagccacatgggcccccagccc
tccacccctcacagccacatgggcccccagccctccacccatcacagccacatgggccct
cagactgcaaacaggaacatggccggcgtgagcgtcctggacccgttctctgaaggcagc
gatccagccttccacaacaagcgaggcccgggaccccgcggcgccccctaccagcaggga
gggggccccacagacccctcaatgaggatgcagtacaatgccaacaaagacccatacgga
gggcccaggaaaggcccggggcccggcgaggcctttggtccgggtcagatgcccagtggt
gccatgcaggacgggtacccccacgggccgccctctgggccccttacagggatggacccc
aggccccagtacccctacggccccggatacgagcggaggccggaccatgtcctggggccg
gatggaggcatggcgccccctggaggtcagagcagcgtagctccatctggaggtgaggcc
ggcatgtacacggccaacagatacacgcagcagagacatggacatgacggttatgggcag
cagtatcctcacggcatggcctacagttcccatcagcccctgtaccctccgcagcagggt
tacaagcgtgcgatggagggcatttatccccctgcgaagcgacatgagggggaggggttt
gcaacgcagcagtttggctcccagcaacctgacttgttcggtccgtacggtggaggcagc
gacagtggggggggctacttgggctccgagcagcggccggtgcaaggccagtacccatat
ccatacacccgggagcggcagcacggtatgatgggccccggggaggggccgcagtccaac
atgtggccccccaggactgactatgcatacagccggcagggccaggggccggcgtacccc
aatgtaagccgaggagacgagcaggagggccgggcaccacaggacagccagtggcccccc
gggcatcccggccaatgccagaccccgtacccccattccgcctcccgctccatgtccccc
ctgccttccagacagcccccctcctccttccaggccctgcccaccgccccaaaccatgtg
agtcgatctcacagcccttcctcgttcccccgccccccgggcggctccctgtcccccaac
agcgctccctacctgccctccataaagaagccagggcccccagcccctcagggccccccc
atcatccacggggagctcagcttcccccccgggtctgtggaggccaccgtccccaaactg
aagccacgacgccggctcaccgccaaggacacaggaaccccggaggcgtggcgggtgatg
atgtcactgaaatccggcctattagcagagagcacctgggctctggacgccatcaacatc
ctgctgtacgacaacagcaccgtgggctccttcagcctctcacagcttcctggtttcctg
gagttgatcgtggagtttttccgccgctgcctcatcaagatcttcggcatcctggtagag
tacgaggtgggagccgagggccagaggacgctgctgggaccgctgcgtgacccccccaag
gaaaaggaggaggaagtgacggagacgccatctgacggacaaacagccgaggttcaaaag
acaccaaagacggaggagggaacgctcccagctgcagccgacattgagaaagaggaagct
gttgtaaaagaggaagtgcaggtggagccccgcccccaacaggccagcaagttcgacaag
ctgccaatcttggtggaggaggagggggaggagtgggaggagatggagaggcgctgggcc
gagctaagccaaccaaacggcttcatcagcggccttctacactggaaagccgggggagga
gactccaccgctcacatccagacgggagacacagtcgccgtggagagggggagaggagac
gaggggggaggggaagtagacgaggagagaggcaaggagacaacacctgaaacacaaaga
ggctacctgtgggagggggggcgtcccagcccgctcagcgaactggaggacgagcctcgc
tgctgggacgaggctcctctgtccacggctgagtcgtggcaggactctctggccagacgc
tgcctgtgcgtctccaacatcgtgcgcggcctctccttcgtccccggcaacgacgccgag
ttgtcgcgccacgccggcctggtgctgatcctcggccggctggtgctgctgcaccaccaa
cacacacccaggaagcgcacggcgccggggctccagcaggcggaggaggcggggctggcg
tgcagccgggacgagtggcgctgggactgcctggcggcgctgcgtgagaacacgctggtg
acgctggccaacatagcgggccagctggacctgtcgctgtacccggagagcatctgcctg
ccgctgctggacgggctgctgcactggatggtgtgcccgtcggccgccgcgcacgacccg
ccctccgcctcggcgctgtcgccgcacagactggcgctggagtgcctctgcaagctgagc
atccaggacggcaacgtggacctgctgctcgccacgccgcccttcagccggcagcagacg
ctcttcgccgcgctgctgcgcctcgtcggcgagcgacgcagccaggtgtgtcgggagatg
gccgtcgccctgctggccaacctggcgcagggcgacgctgcggcggcgcgtgccgtcgcg
ctgcagaaaggcagcgtgggtactctgatcggcttcctggaggacggtgtggccgcggcg
cagttccatcagagcgcgcatgccggcgagccgccgagcgtcaacatgatgtgtcgcgcc
gcccgggcactgctggccatggcgagggcggacgacaaccggacgcagttcgtgctgcac
gagagccggctgctggacgtctcgctgtcggccgcgctcgacgcatctgtgacggccgtc
atgtgcgaagtactcttcaaaatcggccgctcgtga
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integrated database retrieval system
