Etheostoma spectabile (orangethroat darter): 116706774
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Entry
116706774 CDS
T08457
Name
(RefSeq) interphotoreceptor matrix proteoglycan 1-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116706774
Glycosaminoglycan binding proteins [BR:
esp00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116706774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
116706774
NCBI-ProteinID:
XP_032399670
LinkDB
All DBs
Position
18:complement(4509272..4584089)
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AA seq
1463 aa
AA seq
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MQWEFGLVLLFVLTPQAARIKGAGVRLDSGAVGPVRLVERLKTSRSQTEGSGLEVERRRP
KRSVFLHSGVRICPQETINEVLASHQAYYQLRVCQEAVWEAFRIFFDRIPGTAEYQRWVH
TCQHESLCISDLTKNFSSSEEHIGMIHRKVNRMRDRRPPSRGVVTPAPAPEIPEKAGAEV
QTVTPPAAPAIPSPVSVSPSPGLEQTHPIEEDLELPNVVPENPVEQMVDFSIDLVDPGYR
ELLDDPDSPQYIDLAHHLQDQMQHVFDKLPGFKAIRVLGISETQDTDGPGGISVHYSLVF
EINAPKIKSENSETATGTPETSVSSDLREMVAKALREEASLPIDLESLNFKPEAILLPAL
TATSTVEVANESSEPDSHNEFEVSIEPEVDKPRLEVPLTPMEKENALITLLDPTAVPTDG
ITEESEEMYVGELEPLNEDEEEEVLIITHEIETIHHDETGKLVRDYIPTPSVVLELETDA
PYISLSPNLISEEDLTPIDDDSKNPILDAVTPTTQILLTTAPAREEVFDAALPITTPSGI
TGQPPTEPIVTLLEDEEGNALPDEEGPGPYDPGEASETEHVSELETELLEPEGESVVVPE
QIEPEEGNLEVSKPEIEVAEEEEVAEVPGPEEVVEEEEVEVEVSEPEEEVVEEEEVAEVP
GPEEEVVEVSEPEGEVVEEEEVVKVLEPEEEVVEVLEPEEEVVNVLEPEKEVVDVSEPEE
EFELVGDVDEVSEQEEEMVEPAGSEETIPEVSKDIIPEVSEQEEKVVEKEVVEISEVETE
VVETPAPGKGVVEVLEPASEPEQEDHGTEVTETGHEVVETAESEEEPEPSEELVEVVEIL
PKPEPGEESVEEADVLQPDEDVVEDVKPELEVVPLPQEEPEDISEPQLLPEAEEEAADVF
KEEQEEVVENPKEETEPGEGTDLVLPPAEELPGVSEIEEEGVGGDDVPEPNSEEGIVEIS
EPEPEVTELPAESIKILHPDSPDNLHFGEDIFQIVEDNEFLPPVGPNYPQPHEGDDLPIL
PIDIQPTGEDEGEPDHEYPVIGDFYTEEDVDGVDTQVESDTGAATLTETSESNLQFETIS
DIAESTAADNHNTSEGPEVTEDEPKETQESDSSPERDISVTAAPVSDFFPTPLTTEIAPS
LTVDSGIFEVEEQSVIPSTLESSEDNGAAPEAESEPAVVIIDEDLEDAVPKESEGQTIPA
TAAEDVTDETVKDLAVELDQTDVAATESNELPDEGSGFLPVGEEGTAVSVTAPPPVRYLT
TPSMTTAGQGRELVVFFSLRVTNMDFSADLFNKTSPEYRSLENTFLDVLMPFLQANLTGF
KKLEILNFRKGSVVVNSRMKFAKSVPYNITSAVHCALEEFCFAASQNLHIEIDTHSLDVE
PADQADACKFLACEEFSRCMVNGRTKEAQCLCEPGFLSVDGLPCQSLCVLQPDYCQGGDC
HIVPGHGAVCRYQDSYSLPGIAS
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggaatttggacttgtgctccttttcgtcctcactccgcaagccgctagaatt
aaaggggccggcgtcaggctggactcgggggccgttggccccgtgcgtttggtggagcgg
ctgaagacgtcacgctcacaaacagaaggttcggggttggaagtggaaagacggcgaccc
aagaggtctgtgtttttacactccggagtgagaatctgcccccaagagaccatcaatgaa
gtgctcgccagccaccaggcgtattaccagcttagagtttgtcaggaggccgtgtgggag
gcgttcaggatcttcttcgacaggatccccgggacggcggagtaccagagatgggttcac
acgtgtcaacacgagtcactctgcatctccgacctcaccaaaaacttcagcagctccgag
gagcacataggcatgattcacaggaaggtgaaccggatgagagacaggaggcctccgtca
cgcggagtggtgactcctgcaccagcaccggagatccctgagaaagcaggtgcagaggtt
cagactgtcactccacctgccgccccagcaattcccagccctgtgagtgtctctccaagc
cccggcctcgagcagacacatccaatcgaggaggacttggagcttcccaacgtggtccca
gagaatcccgtggagcagatggtggacttcagcattgacctggtggatccaggttacaga
gagctgctggatgatccagactcccctcagtacatcgacctggctcaccacctgcaagac
cagatgcagcatgtttttgacaaacttccgggatttaaagccatccgtgtgctgggcatc
agcgagacgcaggacactgatgggcccggaggaatctcggtgcactactctctcgtcttt
gagattaatgcacctaaaataaaatcagagaattcagagacggcgaccggcaccccggag
acttcagtcagctccgacctcagggaaatggtcgccaaggctttacgtgaggaggcctcg
ctgccgatcgatctggaatcgcttaacttcaaaccagaagcaatcctcctgccagcactg
acagcaacctctacagtagaagtagcgaacgagtccagtgagcccgattcacacaacgag
tttgaagtttccattgagccagaagttgataaaccacggctggaggtcccgctcacgccc
atggagaaggaaaacgccctcatcaccctgctggatcccacggctgtcccaactgacggt
attactgaagagtcagaggaaatgtatgtgggtgagctcgagccattaaatgaagacgag
gaagaagaagtgctgatcattacacatgagattgaaaccattcatcacgacgaaactggg
aaactcgtgagagactacatcccgaccccttctgtggttctggagctggagactgacgct
ccatacatcagtctgtctcctaacttgatatcagaggaagacctgactcccattgatgat
gacagtaagaatcccattttggatgctgtcacccccaccacacagatattattaactaca
gctcccgctcgagaggaagtgttcgatgcggcactcccaatcacaacaccttcaggcatc
acgggccagccgcccactgaacctatagtaacacttctagaagacgaagaaggtaatgct
ctcccggatgaggaaggtcctggaccttatgatcctggtgaggcttcggaaacagagcat
gtttcagagttggaaactgaattgttagaaccagagggagagtcagtggtggtacctgaa
caaattgaaccagaggaagggaatttggaggtgtcaaaacctgagatagaagtagctgaa
gaggaagaagtagctgaagttccagggccagaggaagtagttgaagaagaagaagtagaa
gttgaagtttcagagccagaggaagaagtagttgaagaggaagaagtagctgaagttcca
gggccagaggaagaagtagttgaagtttcagagccagagggagaagtagttgaagaagaa
gaagtagttaaagttttggagccagaggaagaagtagttgaagttttggagccagaggaa
gaagtagtcaacgttttggagccagagaaagaagttgtcgacgtttcagagccagaggaa
gagtttgaacttgttggggacgtagatgaggtttcggaacaagaagaagagatggttgag
ccagccggatcagaagaaacaatacctgaagtttccaaagacattatacctgaagtttct
gaacaggaagaaaaggtggttgagaaggaagttgtagagatctctgaagtagaaacagaa
gttgtcgaaactccagcgccaggcaaaggtgtagttgaagtgttagaaccagcatctgaa
ccagaacaggaagatcatggaactgaagtgacagaaacaggacatgaggtagttgagact
gcagaatcagaggaggagccagaaccaagtgaagaactggtagaggttgtagagatctta
ccaaaaccagaaccaggggaagagtcagtagaagaagcagatgtactacaaccagatgag
gatgtagttgaggatgtaaaaccagagctggaagtagttccactaccacaggaagagcct
gaggacatttcagaaccgcaactactaccagaagccgaagaagaggcagctgatgttttt
aaagaagaacaagaggaggttgttgagaatccaaaggaggaaacagaaccaggggaaggc
acagatcttgttttaccaccggcagaagagttacccggggtttcagaaatagaagaagaa
ggagtgggaggagatgatgtcccagaaccaaattcagaggagggtatagttgagatttca
gaaccagaaccagaggttactgagctgccagctgaatcaattaaaatccttcacccggac
agcccggacaatcttcactttggagaggatatttttcagattgttgaagataacgagttc
cttccaccagttggaccgaactatccccagccacatgagggagatgacttacccatctta
ccgatagacatccaacctactggagaagatgaaggtgaacctgaccatgaatatcctgtc
atcggtgacttttacacggaggaggatgttgatggcgtagacacacaagtggagagtgac
actggtgctgccacactgacagaaacatcagagagcaatctacagtttgaaacaatctct
gatattgcagagtcgacagctgcagacaaccacaacacatcagagggtcctgaagtcaca
gaagatgagccgaaggagacgcaagaaagtgattcatccccagaaagagacatcagtgta
acggcagctccggtttcagactttttccccacacctctgacaactgaaattgcacccagc
ctgaccgtagactctggcatctttgaggtagaagagcaatctgtaattccctctacactt
gagtcttcagaggacaatggcgcagcaccagaggcagagtcggaaccagctgttgtcatt
atcgatgaagacctggaagacgcagtaccaaaagaaagtgaaggccaaacaatcccagcg
acagctgccgaagacgtcacggatgagactgtgaaggacctggcggtggagctggaccaa
acggacgtagcagccacagagtcaaacgagctgccggatgaggggagcggattcctacct
gtgggggaggaaggcaccgctgtcagcgtcacagccccgcctccagtcagatacctgacc
acgccttccatgaccacggccggccaaggcagggagctggtggtgttcttcagcctgcgc
gtcaccaacatggacttctctgcggacctcttcaacaaaacgtctccagagtacagatcg
ctggagaacactttcttagatgtgctgatgccgttcttgcaggcaaacctgacgggcttc
aagaaactggagattcttaacttcaggaagggcagcgtggtcgtcaacagcaggatgaag
tttgccaagtcggtgccgtacaacatcaccagcgccgtgcactgcgccctggaggagttc
tgcttcgccgcctcccagaacctgcacatcgagatcgacacccactctctggatgttgaa
ccagctgatcaggctgatgcctgcaagttcctggcctgcgaagagttctctcgctgcatg
gtgaacggccggacgaaggaggctcagtgtctgtgcgagccgggcttcctgtcggtggac
ggcctgccctgtcagagtctgtgtgtcctgcagcccgactactgccaaggaggcgactgt
cacattgtccctggacacggagccgtgtgcagataccaagacagctactccctcccgggc
attgccagttaa
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