Etheostoma spectabile (orangethroat darter): 116706797
Help
Entry
116706797 CDS
T08457
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116706797 (taf1b)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
116706797 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
116706797
NCBI-ProteinID:
XP_032399711
LinkDB
All DBs
Position
18:complement(5613900..5625853)
Genome browser
AA seq
417 aa
AA seq
DB search
MDEEQTAGYREPCGVCSAVDWGVSDEGRFYCRSCHNVIEEPERWWTQLHPAHPGSPPSAE
GTQNQEEPERGRQWVICEAFQFILRNQANALLKLGVRPTFRDEVLCQLWRIYLQKSRQAY
TNNPVRTSTFKVRGQDSDSDSAAEMSVISASETDGDTNASSTAGSIAGSSSDWSQYSGSL
DAASYLSARLRRCRHGLMTMKKTLALLHLALVWIREPLTLSDLLRLVNEGHVPYVNAYEA
LPDEMKLEGKDALIFRVESVPSHRAVHKEAQTLILFLQLPAFPPISQQSLLHPALLSLRY
LMDANLPDDLHPWVCRLMERAGMADGALHTFNRLSLPVLPLYDVQAAALVIVTMKLVFGL
DDHTEWDLSNDAADQDDTGNLFSVRRWFRLVQTALISAQRRREQHVARNTVDPRNFF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagcaaacggccgggtacagggagccctgtggtgtgtgttcagcggtggat
tggggcgtttcagacgaggggcgtttctactgcagatcctgccacaacgtcatcgaagaa
ccagagaggtggtggacccaacttcacccggctcatcccggatctccaccatcggcagag
gggacacaaaaccaagaggaacccgagcgcgggcgtcagtgggtgatctgcgaggctttc
cagttcatcctgagaaaccaggccaacgctctgctcaaactgggagtccgtccaacgttc
agggatgaagtgctgtgtcagctttggagaatctacctgcagaagagtcgacaggcgtac
accaacaacccagtgaggacctccacatttaaagtgcgaggccaggactctgactctgac
agtgcagccgagatgtctgtcatctcagccagcgagacggacggagacacgaacgcgtcc
agcaccgccggctccattgcagggagctccagtgattggtcgcagtattcgggttctctg
gacgccgccagctacctgtcggcccggctgagacgctgccgccacggtctcatgaccatg
aagaagactctggcgttgctccacctcgctctggtctggatccgcgagccgctgacgctc
agcgacctgctcaggttggtgaacgagggacacgtcccgtacgttaacgcctacgaggca
cttcctgacgagatgaagctggaagggaaagacgctctcatcttcagagtcgagagcgtc
ccgtcccaccgggcggtgcataaggaggctcagactctgattctgttcctgcagcttcct
gcttttcctccaatcagccagcagagtctgctgcacccggccctgctcagcctgcgctac
ctgatggacgccaatctgcccgacgatctccacccttgggtctgccggctgatggagcgc
gccgggatggcggatggagcgctccacacgttcaaccgcctgtccctgcccgtcctgccg
ctctacgatgtccaggccgctgcgctcgtcatcgtcaccatgaagctcgtcttcggcctc
gacgaccacacagaatgggatttatctaatgacgcagccgaccaggacgacacaggaaac
ctgttcagcgtgcggcggtggttcagactcgtgcagaccgccctgatctcagcgcagcgg
aggagagaacaacacgtcgccaggaatacagtggacccaagaaacttcttctaa
DBGET
integrated database retrieval system
