Etheostoma spectabile (orangethroat darter): 116706902
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Entry
116706902 CDS
T08457
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116706902
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116706902
Factors involved in mRNA localization
Other mRNA localization factors
116706902
mRNA cycle factors
Stress granule specific factors
116706902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXR_C1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
DUF150_C
Motif
Other DBs
NCBI-GeneID:
116706902
NCBI-ProteinID:
XP_032399816
LinkDB
All DBs
Position
19:18825317..18840547
Genome browser
AA seq
675 aa
AA seq
DB search
MDGLAVEVRGSNGAFYKGYIKDVHEDSLTIVFENNWQPERQLPFSDVRLPPPADYHKEIG
EGEEVEVYSRANEQEPCGWWLARVRMMKGEFYVIEYAACDATYNEIVTAERIRPLNPNSP
SSRNSFHKVPIAVPEDLRDICENDNIHKEFRKAIGANCIFYSAQTQELIVLSTNETTVKR
ATLLSDMHFRSIRTKLMLMSRNEEATKHLETSKQLASAYQEEVRVREDLMGLAIGSHGAN
IQQARKVPGVTAIELEEESCTFRIYGESPEAVKQAREYLEFTEDYFQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDKKLPREEVGRQGAGRDDTASSKEGMVPFVFVGTKENI
SNAQALLEYHVSYLQEVEQLRLERLQIDEQLRQIGVGYRVPPTRTGGPGVEREKGYLTDD
SSNSLHTSRTYGGRGRGRRPSNSQYSGYGTNSELSNASESEDLGERDQRPRGIGGDERGS
RRGGRGRGSNPGRGRGGPASKPSNSISSVLRDPDSNPYSLLEGEGELADTDISEGMGGDR
RRRSRRRRNDQEPSVMDAAAESDGQAGPSENGLDEEARPQRRNRSRRRRNRGNRPEGGSA
SRDRQPGESVTVADYISRAESQSRQNLPQKENHAGPEPKENGTSATKDERTPSKGSPSKG
KTSASETLTLVNGVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctggccgtggaagttcgcggctcgaatggggccttctacaagggttacatc
aaagatgtccatgaagactcgctcacaattgtttttgaaaacaactggcagccagagaga
cagttgcccttcagcgacgtgcggttgcctcctccagccgactaccacaaggaaattggt
gaaggggaggaggtggaggtttattcgagggccaacgaacaggagccatgtggctggtgg
ctggcccgggtcagaatgatgaagggagagttctacgtgattgagtacgcggcatgtgat
gccacatacaacgagattgtcacagcagagcgcatcaggcccctcaatccaaacagccct
tcctctcgaaactccttccacaaggtccccatcgctgtcccagaagacctcagggacatc
tgtgaaaatgacaacattcacaaagagttcaggaaagctatcggagccaactgcatcttc
tacagtgcccaaacacaagaactcattgtgctgtctacaaatgaaaccacagtaaagcgt
gcaactcttctgagcgacatgcatttccgcagcatccgtaccaagcttatgctaatgtcc
cgcaacgaagaagccaccaaacatttggagacaagtaagcagctagcgtcagcataccag
gaggaggtgagggtcagggaggacctgatgggcctagccatcggctcccatggtgccaac
atccagcaggcacggaaggtacctggtgtcacagcgatcgagttggaggaggaaagctgc
acattcaggatctacggagagtccccagaggcagtaaaacaggctagagagtatcttgag
ttcacagaagactactttcaggtacccaggaaccttgtaggcaaagtcatcggcaagaac
ggcaaagtcattcaggagattgtggacaagtcgggcgtggtccgtgtcaggatcgaggga
gacaacgacaaaaagcttccccgtgaggaggtaggcaggcagggggcaggcagggacgac
actgccagcagcaaagagggcatggttcccttcgtgtttgtgggaactaaagagaacatc
agcaatgctcaggctctgttggagtaccacgtgtcctatctccaggaagtggagcagctg
cgcctagagcgtctccagatcgatgagcagctccgtcagattggggttgggtaccgcgtg
cctcctactcgaactgggggccctggtgttgaacgggagaagggctacttgacagacgat
agcagcaactcactccacacctctcgcacctatggaggccgcggcagagggcgtaggccc
tccaacagccagtactctggatatggcacaaactctgaactgtccaacgcctctgagtca
gaggatcttggcgagcgagaccagaggccccgtggcataggcggtgatgaaagaggctcc
cgacgggggggcaggggccgaggctctaacccaggacgaggccgtggagggccagcatcc
aagccttccaactccatcagctcagtgctgagggacccagacagcaacccctattccctg
ctggagggtgagggagaactggccgacacagacatcagcgaaggcatgggaggagatcgc
cgcagacgctctcgacgccgccgcaacgaccaggaacccagcgtgatggacgctgccgca
gagtcggacggccaagccggccccagcgagaacggactggatgaagaagcacgacctcag
cgccgcaatcgaagccgccgccgccgtaaccgtggcaaccgcccagagggaggttcagca
agccgtgacaggcagccaggtgaaagtgtgactgttgctgactacatatcccgtgccgag
tcccagagcagacagaacctgccccagaaggaaaaccacgctggccccgagcccaaggag
aacgggaccagcgccacaaaggatgagcgaacaccctccaagggttcccccagcaaaggc
aagacctcggccagcgagaccctgaccttggtcaacggggtctcgtaa
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