Etheostoma spectabile (orangethroat darter): 116706992
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Entry
116706992 CDS
T08457
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116706992
09122 Translation
03013 Nucleocytoplasmic transport
116706992
03015 mRNA surveillance pathway
116706992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116706992
03041 Spliceosome [BR:
esp03041
]
116706992
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116706992
Spliceosome [BR:
esp03041
]
Complex C
Other components
EJC/TREX
116706992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
116706992
NCBI-ProteinID:
XP_032399978
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All DBs
Position
19:13436159..13463016
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AA seq
1213 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLLKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQEEESDESPAVPEEDEDHSEDN
DSSSYVSDKKHRSLPPTPSMTRAEEKGGGDAMMGHGMIARGPDMGPGPTLQPQESLEAPG
ARMQRATFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVSRAQEKEGTAPIEPGS
AHPVLHLSRSARVSAGGQVHEDSDDDDDGDDESENDEDWGPGPGVAPRGNRVPPQPQQMP
PSVPSTAARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQSPPDTD
NQEGEGSEASRGPRVLPFPSSTMQRQDSDSSSRSSSPEPSAERRPGPLSLLVHKMESEGA
FRAAEATSAVDMSAETAHSTAGSGSSSESPLLRLERKKLLENREMEEERRLKEEKEREQR
QKQEKERKKIQEQEREEKRLEEEKEKERKQLEEDEKQRLKEEREKERKHQEEKKERKRQA
EEKVKRQETANKDRVAVTEARDSGSSSDSDSKSDSSSRSSQSSSSTGDTASHAMLKKADQ
GREAEDEKKTNLSKGAEKRYLSKREVSEPSAAAVTEVEPDSESSMAQQPPSGAEPENSEG
RLEESTTPKAFAARKISLTSSKTSPATTDGVAGEPEMGTAAGRKRRWGSSTAVTAKKPSI
IINTDSLKSLIPDIKVNQEAVVELHPEELQMSGDEECLDTSRGDQDKGLKIRRTVTQVVP
GDQENGQTNKEEEVDKTEKEKQRRPSRDKRKNSVSEEASETKTSVKLEGEPKKVTPSDSL
VRRSISQQKSGVSVTIDDPIRTNRQPSPPHGKVSNIIHVTNLVRPFTLGQLKELLKRTGS
MVEEGFWIDKIKSHCYVTYSTTEEAVATRAALHGFKWPPSNPKVLCVDFCEQDELDVHKG
ILKLKREEDHVALPGGPQNRLPPLMPERDRDRERDRDRDLERDRGAVGVRDLWAEREREM
ERRERARGEREWDRDKVREFARPGEDGQRSRSRDRERRRRERAKSKERKTDKKAEKGDEP
PVKLLDDLFLKTKAAPCIYWLPLSEEQAAQRLLDRTERQKERERRRKEQQEEEEKKREEE
KKERLKGREKDTSVIVSGGAAARGADRDRERDRGRDREGDKKRDNNYRPRRPSVGAGSGR
RSRSRSNPRDRRR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgcttagagtcgcggat
ttgaaagctgctttggagcaaagaaacctgccaaagagtggacagaaaaacacactcttg
aaacgactgaaaggggctctgatgctggaaaatcttcagaagtcgtcctcctctcacagt
gggctacagcccaactcacagataggagaggagatgagccagaatagcttcataaaacag
tacttggctaaacagcaggagcttcttcgccagagactggagagagaagcccagcaagag
gaagagtcagatgaaagcccagcagtgccagaggaggatgaagaccactcggaggacaat
gacagctcttcctatgtctctgacaagaagcatcgctccctaccccccactccctcaatg
accagggcggaggagaaaggaggaggtgatgcaatgatgggtcatggaatgattgcacgc
ggacctgacatgggccccggtcctaccctccaaccccaggagtcccttgaggctccagga
gctaggatgcaacgagccacctttcatcaagggcataaggagccaccggccccatctcct
ccccgtgccgtagcttccttgtcagtgcgcgtcctgggccagcctgaccgccaggggctg
ccccctgccgtatctcgagcccaggagaaggagggcactgcaccgattgaaccaggatca
gctcatcctgtcctccatcttagtcgttctgccagggtctcagcaggaggtcaagtccat
gaggacagtgatgacgatgatgacggtgatgacgagagcgagaatgatgaggactggggg
cctggtcccggcgtggcaccaaggggcaacagagtacctccccagccgcagcagatgcct
cccagtgtcccatcaacagctgccagatccaaacgcaagcttcagcctccgcagcacatc
ccaccaccacaggtacaccacacaccaatgcaactgcgccaccccactcctcctccctct
cccccccctgacctgtttcccctacctgacactcccaaacagagcccaccagacacagac
aaccaagagggagaaggctctgaggcttcacgtggtccaagggtgctgccattcccatct
tccaccatgcagaggcaagactctgactcaagctctcgttccagcagccctgagccctcc
gcggagcgcaggccagggcctctttctctgctcgtacacaagatggagtcagagggggct
ttccgtgcagcagaggccacgtctgctgtggatatgtcggcagagacagcacactccact
gctgggtctggcagttccagtgaatctccactgctaagattggagagaaagaagctacta
gaaaacagagagatggaggaagaaaggcgattgaaggaggagaaagagagagaacaacgc
cagaagcaggagaaagaaagaaagaagatacaagaacaggagcgagaggagaaacgcttg
gaagaagagaaggaaaaagagaggaaacaactggaagaggatgagaagcagcgtctgaaa
gaggagcgagaaaaagagagaaaacaccaggaagagaaaaaagagagaaaacgccaggct
gaggagaaggtaaagagacaggagacagcaaacaaagatagggtggctgtcactgaggcc
cgagactcaggttcctcatcagattctgactccaaatcagactcctcttcacgctcatca
caatcctcttcttccaccggggatacagccagccatgccatgctgaagaaggcagaccaa
ggacgagaagcagaggatgagaaaaagactaacctgagtaaaggggcagagaaacgatac
ctttcaaaaagggaggtgtccgagcccagcgcagctgccgtgacagaggtggaaccagac
tctgagagctccatggcccagcagccaccttctggggctgagccagagaacagcgagggc
cgtctggaggagagcaccactcctaaggcttttgctgctcgcaagatatccttgaccagc
agtaagacgtctcctgccaccacagatggagtagcaggtgagcccgagatgggaactgca
gcagggaggaagaggcgatggggctccagcacagcagtcactgctaagaaaccatccatc
atcatcaatactgactcactgaagtcattgatcccagacatcaaagtgaaccaggaggca
gtggtggagctgcacccagaggaactgcaaatgtctggggacgaggagtgtctggacacc
agccggggcgaccaggacaaaggcctgaagattcgacgaaccgtcacacaggttgttcca
ggtgaccaggaaaacgggcagacaaataaagaggaagaagtggataaaactgagaaagaa
aaacaacgcaggccctccagagacaaaaggaagaacagtgtttctgaggaagcttctgaa
acaaagacatctgttaagctcgaaggagagccaaagaaagttacccccagcgacagtctg
gtgcgtcgctccataagtcaacagaagtctggcgtgtccgtcactatcgatgaccccatc
cgcacaaacaggcagccctcgccgcctcatggcaaagtctcaaatatcatccatgtgacc
aacctggtgcgaccattcaccctaggccaacttaaagagctgctgaagaggacgggcagc
atggtggaagagggcttctggatcgacaaaatcaagtctcactgctatgtcacatactct
acaacagaggaggctgtcgccaccagagctgccctccacggattcaaatggcctccaagc
aatcccaaggtcctctgtgtcgatttctgtgagcaggatgagctggacgttcacaaaggc
atcctgaagctaaaaagggaggaggaccatgttgccctgccaggtggtcctcaaaaccgg
ctgccccctctgatgcctgagcgggacagggacagagaaagagacagggacagagatcta
gaacgggaccgtggcgcggtcggagtgcgggatctgtgggcagagcgggagagagaaatg
gagcgccgtgaacgagcccggggcgagcgggaatgggaccgggataaagtccgggaattt
gccaggccgggagaggacggacagcgttctcgatccagagacagagagaggaggaggagg
gagagggccaagagcaaggagaggaagactgataagaaggcagagaaaggagatgagcct
cctgtaaaactgctggacgacttgttcctgaagaccaaagcagctccgtgtatatactgg
cttcccctctcggaggagcaggcggcacagaggctgttggaccgcaccgagcggcaaaag
gagcgtgaacggaggcgcaaggagcagcaagaggaggaggagaagaagcgagaagaggaa
aagaaagagaggctgaagggtcgggagaaggacaccagcgtgatagtgagcggcggagca
gccgcgcgaggagccgacagagaccgagagagggaccgcggccgagacagagagggggac
aagaagagggacaacaactaccggcccagacgaccctctgtaggcgctggcagtggacgc
cgctctcgcagccgtagcaacccgagagatagacgccgctga
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