Etheostoma spectabile (orangethroat darter): 116707049
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Entry
116707049 CDS
T08457
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04371
Apelin signaling pathway
esp04910
Insulin signaling pathway
esp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116707049 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116707049 (ppargc1a)
04920 Adipocytokine signaling pathway
116707049 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
esp03029
]
116707049 (ppargc1a)
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
116707049 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116707049
NCBI-ProteinID:
XP_032400073
LinkDB
All DBs
Position
19:918379..1249085
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AA seq
1289 aa
AA seq
DB search
MDGYARTEDESFSSCLLNLTWENCYEQCAALVGEDQPFCPDLPELDLSELDVSDLDADSF
LGGLKWYNDQSEIISTQYGNDTSNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEA
LADGDVTNASDQSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAA
SSNHRIRPPAVVKTESPWNGKARGGSSQQNRPVRRPCTELLKYLTATDDILLHTKASDAK
STWGGANSRDKSGLGLGASSSSSSPSSSSTSSFSSLSSTSSSSSSTTSKKKSAVPSQQQQ
QQQQQPPQHHQRGESRAAGECSVAGVGAGKWQRCTHDAGVKESEGASIPVGHRTSTCGHA
RPKLEHGSPSEEGRPPGDVGRLAAARFIRYMHSYSLPPREVSHSCEHCREAAGATQATEG
FGRQGRRKSSGASRAPHRYITVTIKERDEKPGHPLLSQLLTSKQRPAQYRAHLLSPKSTP
LPIIQSKSAGKRSVSPAQAPSKVEEEELGGTTDCRNQEVCQLEEPDLGSLLSPLALDLES
WGNQQDSGLDMGFGLELGWLNQGLYGEDVGRDDDYDDDDDDDDDDHVMGSPTAVLSQGQP
SPLFPDTRIAEAAPPCIIQGQGHPHRQALSEHPDDQGLLLLAKPTTLPLPLTPESPNDHK
GSPFENKTIERTLSVEISGTPGLTPPTTPPHKASQENPFKASLKTKLSSCSSSALACKRA
RLSELCPGALAPAPGASGGGPTKKGPEQTELYAQLSKASTTLPYSVTQHSVGVGLEEHRS
TSNNKRAVPRSYSDHDYCQASASTKKDGGTVTVTITTAAEMTLTSGANAAPMPTTGKVED
RHVECKDSAIPPSSLSSSSSCSPSSASSGPLAEQVNFASVNGEAARVQELGKQTLTQTSQ
IPSQEATTDWDQLHSAAISRKLLCDQEIRAELNKHFGPPLKAFYSPGGQKREPGSKPDKA
AAPKTLTDGENGSYSQRLPGSSYLHPGFLPFQDELELGEGRESRFLYPWEGTPLDLLFDC
PPCSPSCSPPSSCSPSRGSISPPSSLLLSPSRPFCWTSSGSRSRSHSGSRSSSSHYRRRS
LSSSPDRRPSSWSRHNNPDPSTIRSRTHKSPHPKSRSPLSRRPRYDSYEEYQHERLKREE
YRRDYEKREFERAEQRERQKQKAIEERRVVYVGRLRSDCTRTELKRRFEVFGEIEECAVN
LRDDGDNFGFITYRYTCDAFAALENGHTLRRSNEPQFELCFGGQKQFCKSHYTDLDSHSD
DFDPASTKSKYDSMDFDSLLREAQHSLRR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggacggttatgcccggaccgaagatgagagcttctcctcctgcctcctgaacctcacc
tgggagaattgctacgagcagtgtgctgccttggttggtgaagaccagcccttctgccca
gaccttcctgaactagacctctcagagctggatgtcagtgacttagatgcagacagcttc
ctgggtggcctcaaatggtacaatgaccaatcagagattatttccacccagtatggcaac
gatacatccaatctctttgagaagatagatgaagaaaatgaggccaacttgctggcagtg
cttacagagaccctggacagcatcccggtggatgaggacggattgccttcgtttgaggcc
ctggcagatggggacgtgaccaatgccagtgaccagagctgtccctcctcccctgacggc
tctccacgcaccccagagcctgaggagccttccctgctgaagaagctccttctggcaccc
gcaaactcccagctcagctataatcaatacacaggtggcaaggcacagaaccatgcagcc
agcagcaaccaccggatcagaccacctgccgtcgtcaagacggagagcccctggaatgga
aaagcaagagggggctccagccaacagaaccgcccggtgaggcggccttgcactgagctg
ctgaaatacctaacagccaccgatgacatcctgctccacaccaaagccagtgacgccaag
agcacctggggtggtgccaatagcagggacaagagtggcctgggacttggtgcctcttcc
tcttcctcttcgccgtcctcgtcatccacatcctcgttctcctccctctcatcaacctct
tcttcatcttcctccaccacctccaagaagaagtcagctgtaccgtctcagcagcagcag
cagcagcagcagcagccgccgcagcatcaccagcgaggtgagagccgggctgcaggcgag
tgtagtgtggctggtgttggggctgggaagtggcagcgttgcactcacgatgccggggtt
aaggagtcggagggtgcttctatccctgtcggccacagaacctccacctgcggccatgcc
cgccccaaactggagcacgggtcgcccagtgaagaaggaaggccgccaggcgatgtgggc
cgcctggccgccgctaggtttattaggtatatgcattcttattccctccctccccgagag
gtgagtcacagctgtgagcattgccgagaggctgcgggcgccactcaggctactgagggc
tttggcaggcaaggccgtagaaaaagtagcggtgctagccgtgcacctcataggtacatc
acagtgacaattaaggaaagagatgagaagccggggcaccctttacttagccagctgctc
acctccaaacagaggcctgctcaatatcgagctcacctactctcacctaagagcacccct
ttacccatcattcagagcaaatcagcaggtaagaggtctgtgagcccagcacaggctccc
tcaaaggtggaggaggaagagttgggagggaccactgattgtagaaaccaggaagtatgt
cagcttgaagagcctgacttagggtccctgttgtcacctctggccttagacctagagagc
tggggtaaccagcaagactcagggctagacatgggctttggactagagctcgggtggcta
aaccaagggctctatggggaggatgttggccgtgatgatgattatgatgatgatgatgac
gatgatgatgatgaccatgtcatgggcagccccactgcggtgctctcgcagggccaacca
agcccactcttcccagatactagaattgcagaggccgcccctccctgcatcatacaaggg
caagggcacccacacaggcaggcactcagcgagcaccccgacgaccagggcctcctgttg
ttagccaaaccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaag
ggatcaccgtttgagaacaaaaccattgaacgcacattaagtgtggagatttctggaacc
ccaggtctgacaccacctaccactcccccacacaaagccagtcaagagaatcctttcaaa
gcatcgctcaaaaccaagttgtcttcatgttcctcatcggccttggcatgcaaaagagcc
aggctgagcgaattgtgccccggtgctctggccccggccccaggtgcctcaggcgggggc
cccaccaagaagggtcccgaacagactgagctttatgcccagctgagcaaagcgtccacc
accctaccttactcggtcacccaacactctgtgggggtcggccttgaggagcatcgcagc
actagcaacaataagcgggcggtgccccgtagttacagtgaccatgactattgccaagca
tcagctagcactaagaaggacggtggcacagtcactgttaccataactacagcagcggaa
atgaccctcacctcaggtgccaacgctgctcccatgcctactacaggcaaagtggaggac
aggcatgtcgaatgtaaggactcagcaattccaccatcctctttatcatcttcatcttct
tgttctccatcatcagcttcatctggtcctttggcagagcaggtaaattttgcctctgtg
aacggagaagcagcccgggtccaggagttagggaagcagacccttacacaaacctcccag
atcccctcacaagaggccactactgactgggaccagctacactctgctgccatcagccgg
aagctcctgtgtgaccaggaaatcagagcagaactcaacaagcactttggccccccctta
aaagccttttatagcccgggtggccagaagagagaaccaggcagcaaaccagataaggct
gcagccccgaagacacttacggacggagagaatggctcctactcacagaggctgcctggc
tccagctacctgcacccaggattcctgcccttccaggatgagttagagctgggtgagggc
cgtgagagtcgcttcctctatccgtgggagggcacccctctggaccttctctttgactgc
cccccctgctctccctcctgttccccaccatccagctgctccccttcccgaggctccatc
tccccaccttcctccctcctcctctcgcccagcaggcctttctgctggaccagcagcggc
tcccgctctcgttcccactctggctcccgcagctcctcctcgcactaccggaggcgctcc
ctttccagctcacctgacagacgcccctcctcctggtctcgtcacaacaacccagatcca
agcaccattcgttccaggactcacaagagcccccaccccaagtctcgatctcctctcagc
cgcaggccaaggtatgacagctacgaggagtaccagcacgagaggctgaagagggaggag
taccgccgggactacgagaagcgggagttcgaaagggccgagcagagagagaggcaaaag
caaaaagcaatagaggagagacgggtggtgtacgtggggcgactgaggtccgactgcacc
cggacagaattgaagcgccgctttgaagtcttcggcgaaattgaagaatgtgcagtgaac
ctgagagacgatggggacaattttggcttcatcacataccgctacacttgtgacgctttt
gccgcccttgagaatggacacaccttacgcaggtcaaacgagcctcagtttgagctgtgc
tttggcggacaaaagcagttctgcaaatcacattacacagacttggactctcattcggac
gacttcgatccagcttccacaaaaagcaagtatgactccatggattttgacagcttgctg
agagaggcccagcacagcctgagaaggtaa
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