Etheostoma spectabile (orangethroat darter): 116707167
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Entry
116707167 CDS
T08457
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116707167 (sh3tc1)
Membrane trafficking [BR:
esp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
116707167 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
SH3_1
TPR_8
TPR_10
SH3_9
TPR_7
ARM_TT21_4th
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
116707167
NCBI-ProteinID:
XP_032400309
LinkDB
All DBs
Position
19:16186039..16206842
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AA seq
1326 aa
AA seq
DB search
MSARSDRDTGGCGPRRKSPTDGQQHREAAETSNRHSRIMRAFSRDAASLKATVSTCEENV
PTALPVLLDVVRGPERLPADEHSQEMLKGKLRILQADSTEVNALFTEMSTHLISISSEEK
VIFVTFKTFEEIWKFTTYYTIGFLGRCMENLLLDQKFWLTSLEEDIAIEVSIQENTLNLM
YKGILMQEGSLFASCSTNQMFDSSTSGGDLYLEQGDIAHFEPPFLGSGWTVLCLADGARG
TAPKPALEPVIPFHQWFLKSCAESILIGDGKPACDFPLQFARGTCLATVEYDAEGPDELS
VAPGDCIIIAGLLGSCFDWFLGRKEATGEVGLVKTSLVKPSADTYDSADIFLDGEDGTFF
SLQEDKVIEESTASLKKKSQNDTGQNYKLDMISYQDSEKKTSSNRDDTQQANLKRNIQRI
LDHGKDSSSDSVVTVNGTPEDTVSATETENPSPPRFTVQTVVEGNNNTENFIPLFSFLEG
QDYKIEFGIMYRLSSELLASSIFTGHANKDELIAFLGVARETARKKRLLWSQTRLCFLLG
KLCAGRLKLSQARVYFEEALSVPQEGFTDLRLLASIYSNLVTIYLLQKNTESFFALTERL
VALLLGIPDCLECLEDNSALKYILKKAVLSHNKMAEARACHQLAKHHWTRAEGVQAAPYL
ERLIVLCAKAQRTWGIAPSQMYLTLGRLYSKLRLPHLSVSSARRASMQPSATLTDCLSSM
DLVLDNFNRLFGITEQEASVPPQVAPYLYQALFSNKVQGGGSDRYHVLSHRLTVCLCQLF
FKHRMVGQAISHMHTLINKSPTSQRPCISVPERNSALIWLAWLHIVNNQPHVALDILDSV
LASMPEHCTTPQEGVVLNMRGVALRCMGYLRRAAESYQAAVDICQEYEDMPNWAVAQANL
GLLCLKAGAKGLAQRHLTEAVQLFSELDEKGHEANFIQVLLELGQHYVKQQQLDFGKGCY
EWALLLAISANLLDCQLTATKQLSRLYGCEIPEQAQCIIYSQHQVQLLRHTGDRAQEGDA
LVAISQLYLTLATERAYRAALDFTKTSLGIFIDLGCREKEAWGWLQAGKIYHLLHQTELV
DLYVQAAQDVALSTGDTKFILKLLEAAGDIFFNSNHDRDKAITFYRDRALPIAVKSSSVR
SRLRLCNKLTDLMLSLKLYGEAVEFAQTALDISITLGESLNERVAYHRLASLYHSLDQYE
LAEHHYLKTLTLCPTTLQFDEETLYYVRVYQTLGDIIFNDLKDPFDAAGYYQLALAAAMD
LGNKRSQLQLCTRLATIYHNFLIDRELSLYFYQKARAFAAELNVRRINISPGQQCSSIAQ
YKTAGQ
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaggtcggaccgagacaccggcggctgcgggccccggagaaagagccccacc
gacggccagcagcaccgcgaggcggcagagacatcaaacagacacagcagaataatgcgt
gctttctccagagatgctgcaagtctgaaggcaactgtgtcaacatgtgaggaaaacgtc
ccaacagctctgccagtgctgctggatgtggtccggggtccggagcggcttcctgcagac
gagcactcgcaggaaatgctgaaagggaaactgcgcattctacaggctgacagcaccgag
gtcaacgcgctgttcacggagatgtctactcatctcatctccatcagcagtgaagaaaaa
gtgatttttgtgacattcaaaacatttgaggaaatatggaagttcaccacatattacaca
ataggttttctgggtcggtgtatggaaaatctgttgttagaccagaagttctggctcact
tctttggaggaggacatcgcaattgaggtttccattcaggagaacactcttaacctgatg
tacaaaggcatcctcatgcaggaaggctcattgtttgctagttgcagtaccaaccagatg
tttgacagctccacctctggaggggacctgtacctggagcagggagacatagcccatttt
gaacctccgtttctgggctcagggtggaccgtcctctgcctggccgatggagcccgaggc
actgcacccaaacctgctctggagccggtcatcccctttcatcaatggtttctcaaatcc
tgtgcagagagcattttaattggtgatgggaaacctgcctgtgacttccctctgcagttc
gccagagggacctgtctggcgacagtggagtatgatgctgagggaccagatgagctgagt
gtggcacccggtgattgtatcattattgcgggacttctggggtcttgttttgattggttc
ttagggcggaaggaggcgacaggagaagtgggtctggtcaagacaagcctggtgaaaccg
tccgccgacacttacgactcagcagatatttttttggatggagaggacgggacattcttc
agtctgcaagaggacaaagttatagaggaatcaactgcctcattgaagaagaaatctcaa
aatgatactggccagaactacaaactggatatgatcagttaccaagactctgagaaaaaa
acatcatcaaacagagatgatactcagcaagctaacctgaagagaaatattcagaggatt
cttgatcatggaaaggactcttcatcagattccgtagtgaccgtgaacgggactccagag
gacacggtctcggctacagaaacagaaaacccaagccctccccgtttcactgttcagaca
gttgtagaaggaaacaacaacactgagaactttattcctctcttctcctttttggaagga
caagactacaaaatagagtttggcatcatgtatagactgagttctgaactcctcgcctcc
tccatatttaccgggcacgccaacaaggatgagctgattgccttcctgggagttgctagg
gaaacagccaggaagaagcgactcctttggtcgcagactcgtttgtgcttcctgctgggt
aagctctgtgctgggaggttaaagttgagccaggctcgggtttactttgaggaagccctc
agtgtgccacaagaaggcttcacagaccttagactgttggccagcatctactccaaccta
gttaccatatatcttttgcagaaaaatactgaaagtttctttgctctgacagagcgactt
gttgccttgctactgggaatcccagactgcctggaatgcttagaggacaactctgctctt
aaatacatcctcaagaaagctgttctctctcacaacaaaatggcagaggcccgggcttgt
caccaattggcgaagcaccactggactcgtgctgagggggtgcaagcggccccttatctt
gagagactaattgttctttgtgccaaagctcaaagaacatggggcatcgctcccagtcag
atgtaccttaccctgggaaggctatacagcaaactcagacttccccatctcagtgtcagt
tcagccaggagagcttctatgcagccctctgctacattgactgactgccttagcagcatg
gatctagttctggacaatttcaacagactgtttgggatcacagaacaggaagcgtccgtc
ccacctcaagtggctccatatttataccaagcgctcttttctaacaaagtccaaggggga
ggaagtgatcgataccacgttttgagccatcgactcactgtttgtctctgccaactcttt
ttcaagcacaggatggttggacaagccatctcccatatgcatactctcatcaacaagagt
ccaacctcacagcgaccctgcatctctgtcccagaaagaaacagcgccctcatctggctg
gcatggcttcacattgtcaataatcagccacatgttgctttggatatcctggactctgtc
ctagcttccatgccagaacactgcactacgcctcaggaaggtgtggtcctcaacatgcgt
ggcgtggcacttcggtgcatgggctacctccggagggcagcagagagttaccaggctgct
gtggacatttgccaagagtatgaggacatgccaaactgggctgtagctcaggccaacctt
gggctcttatgtctgaaggccggtgccaaaggactggcgcagagacacctgactgaggct
gtgcagctcttctctgagctggatgaaaaaggtcatgaggcgaacttcatccaagtgctg
ctggagctggggcagcactatgtgaagcaacagcagctggactttggcaaaggatgctac
gaatgggctctgctgctcgctatcagtgccaacctattagactgccaactgactgcaacc
aaacagctgagccgtctctatgggtgtgagattccagagcaggcccagtgtatcatctac
agccagcaccaggtccagctgctgagacacaccggagacagagcacaggagggagacgca
ctggtagccatcagccagctctacctcaccctggccacagagagggcgtacagggcggct
ctcgacttcaccaagaccagtttgggtattttcatcgacctgggctgcagggagaaggaa
gcgtggggctggctgcaagctgggaagatctaccacctgctgcaccagacggaactggtg
gacctttacgttcaggcagctcaggatgtcgccctgagcacaggagacaccaagttcatc
ctgaagcttctggaagctgcaggcgacattttcttcaacagcaaccacgacagggacaag
gctatcaccttctacagggatcgtgctctgcccattgctgtgaagagcagcagtgtgcgt
tccaggctgaggttgtgtaataagttgactgatctgatgctcagtctcaagctgtatggg
gaagctgtggagtttgctcagactgcgctggacatcagtatcactctgggtgagagtctg
aatgagcgagtggcttaccatcggctggcctctctgtaccacagcctggaccagtatgaa
ctggctgaacatcattacctgaaaaccctgaccctctgtccaacaactctacagtttgat
gaggaaacactgtactatgttcgggtataccagacgctgggggacattatattcaatgac
ctgaaggacccattcgacgctgcaggctactaccagctggctctggctgcagccatggat
ctgggcaacaagaggtctcagctgcagctgtgcacccgcctcgccaccatctaccacaac
ttcctaatagaccgggagctctctctctacttttaccagaaggctagagcatttgctgca
gagctgaacgtgaggaggattaatatctcaccgggtcagcagtgtagcagcatcgcacag
tacaagaccgcaggacaatag
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