Etheostoma spectabile (orangethroat darter): 116707179
Help
Entry
116707179 CDS
T08457
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116707179 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116707179 (taf6l)
03036 Chromosome and associated proteins [BR:
esp03036
]
116707179 (taf6l)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116707179 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
116707179 (taf6l)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116707179 (taf6l)
STAGA complex
116707179 (taf6l)
TFTC complex
116707179 (taf6l)
SAGA complex
116707179 (taf6l)
SLIK complex
116707179 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
116707179
NCBI-ProteinID:
XP_032400325
LinkDB
All DBs
Position
19:15803671..15816556
Genome browser
AA seq
639 aa
AA seq
DB search
MADREERRFAEVSRESVKLMAESAGVELADDVAALLAEDVCYRLREATQSSSQFMRHAKR
RKLTVEDFNRALRWSKVEAICGYGAQDALPFRSAKEGELFFTEDRDINLVELALATNIPK
GCAETMVRVNVSYLDGKGNLEPQGTVPTAVQSLSDDLLKYYQQITRAILGEDPHLMKVAL
LDLQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSLSQPAEGGSGSQLGSVGGAMGYRVSSPGLSPPPEPLSEAALGIA
SHLQAGGAGCPWEEWTPVPLPAMYCELYSFFGDSLAVRFSTGPGFGSFPPCAPSHSDSAR
KEPPGPASNPDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLAATGSGRSLARSSSVQRS
RSSSSRSGQRSAGPSRDVFPKARFTSPQTGLPVFSFLIGGRQMGRRCQGRRPFQTTFAPT
PPLSAIAPRAYAQKLPVIGRVGKPVRRWACSHYSLHLPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgggaggagcgccgcttcgccgaggtttcccgggagtctgtcaaactgatg
gccgagagtgcaggcgtggagctcgccgacgacgtggctgctctgctggctgaggacgtg
tgttaccggctcagggaggcaacgcagagcagctctcagttcatgagacatgccaagagg
aggaagctgacagtggaggactttaacagagctctgcgctggagcaaggtggaggccata
tgtggctacggggcccaggatgctcttcctttccgctcagcgaaagaaggagagcttttc
ttcactgaggatcgggacatcaacctggttgagttggctctggccaccaacattcccaag
ggctgtgctgagaccatggtgcgagtaaacgtgtcttacctggatgggaagggcaacctg
gagcctcaggggacagttcccacagcggtgcagtctctgtcagatgacctgttgaagtac
taccagcagatcacacgggccatcctgggagaggacccccacctcatgaaggtggctctg
ctggacctccagtccaactccaagattgctgccctcctgccatactttgtgtatgtcatc
agtggggtgaagtcagtaagccatgacctggagcagctcaacaggctcctccacatggtg
aagagcctggttcagaacccctacctgtacctgggctcgtacgtgcgcagcctggtctcc
agcgtcatgtactgcatcctggagccgctggccgcctccatcaacccgctaaacgaccac
tggaccctcagggactacgctgccctgctcctcagccacatcttctggactcacggcgat
ctggtgagtggtctgtaccaccagatcttgctgtcgctccagaaggttctgtctgacccg
gtgaggccgctctgctcccactatggagctgtggtggggcttcatgccctgggatggaag
gctgttgagagagtgctcttcccacacctccctgcgtactgggccaacctccaggctgtg
ctggatgactactccgtgtccaacgcccaggtcaaagcagacggacataaggtgtacgga
gccatcctggtggcagtggagcgcctgctgaagatgaaggctctgtctctgtcccagcca
gcggaggggggctccgggagtcagctgggctctgtggggggggctatgggttacagggtg
agctcccccggtctcagccccccccctgagcctctgtcggaggccgccctgggaatcgcc
agccaccttcaggcgggcggggccggctgtccctgggaggagtggaccccggtccctctg
cctgccatgtactgtgagctctactccttcttcggagacagcctggcggtccggttcagt
accgggcccgggttcggcagcttccctccctgcgccccgtcccattccgatagtgccagg
aaggaaccccccggccctgcctccaaccctgacaccacccgaaagatgcctcagctgact
gccaacctcaacatcagcccccggcaggatgggagtccacgcaccgatccgccccccccc
agcctggcagcaaccgggtcaggaaggtccctggctcgctcctcctccgtgcagcgctcc
agatcttcctcgtcccgttcgggccagcgttcagccggtccgtctcgggacgttttcccc
aaagctcgcttcacctctcctcagacgggacttcctgtgttctccttcctcatcggaggg
cggcaaatgggccgccgttgccaaggccgccgtcccttccagaccacttttgccccgacc
ccacccctctctgcaatcgcaccgcgtgcctacgcccaaaaactgcctgtcattggcagg
gtgggcaaacctgtgcgccgctgggcgtgttcccattactcccttcacctgcctctctaa
DBGET
integrated database retrieval system
