Etheostoma spectabile (orangethroat darter): 116707203
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Entry
116707203 CDS
T08457
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116707203
Transcription factors [BR:
esp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116707203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116707203
NCBI-ProteinID:
XP_032400375
LinkDB
All DBs
Position
19:complement(17187314..17192577)
Genome browser
AA seq
306 aa
AA seq
DB search
MYSMMEHELKPSGQPPSHQTSQGMSPITGNMTGSMGGNGNSHPGSKTACAPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQMGKYPLSAGNLLAAAQGQGGSPRMDSYGWGPAGGYAG
MQGEALGYTQQLHRYDLSALQYPPAMTAAQTYMNGANSYSPMSYSSSPQQHSPVTMSMVK
AEPVSHSPPTGTPSHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYTSVQQHYLTGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagccgagcggccagcccccttctcaccagaca
tcccagggaatgtcaccaatcaccggcaacatgaccgggagcatgggcggcaatggcaac
tctcacccgggctccaagacggcatgcgcacctggagtcgaccccatggataaagtcaag
cggcccatgaacgcctttatggtctggtccaggggacagaggcgcaagatggctcaagaa
aaccccaaaatgcacaactctgagatcagcaagcggctgggagccgagtggaaactcctg
acggacgctgagaagcggcctttcatcgacgaggccaagcggctccgggcggtccacatg
aaggagtaccccgactacaagtacaagccccgccgcaagaccaagcccctgctgaaaaag
gacactcagatgggcaagtacccgctgtcagcaggcaacctgctggcggcggcgcagggc
caaggtggtagtccgaggatggacagctacggctggggccccgccgggggttacgctggc
atgcagggcgaggcgctcggctacacgcagcagctccaccggtatgacctgtcagctctc
cagtacccacctgcaatgacggcagcacagacgtacatgaacggagccaactcctacagc
cccatgtcctacagcagcagtccccagcagcacagccccgtcaccatgtccatggtgaaa
gcggagccagtgtcccactcgcccccgacggggacgcccagccaccaccggggccctctg
cagggcgacctcagggacatgatcagcatgtacatccccggccccgggggggacgctggg
gaccccacggcagcacagaggggctacaccagtgtccagcagcactacctcactggaacc
gtcccactcacacacatctag
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