Etheostoma spectabile (orangethroat darter): 116707246
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Entry
116707246 CDS
T08457
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp02010
ABC transporters
esp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116707246
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116707246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esp02000
]
116707246
Transporters [BR:
esp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116707246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
116707246
NCBI-ProteinID:
XP_032400403
LinkDB
All DBs
Position
19:2953943..3152278
Genome browser
AA seq
2238 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVIWPLFLFFILVWVRSTNEPLHQGQCHYPNKA
MPSAGVLPWLQGMICNVNNPCLNYSTPGEAPGQVNNFNNSIIAGMLIELQTLLVNRSILS
KAQLLADDLAQWDSVLSQSTLGNAQPMILRSILRDNEAFSTYLKENLSVQPSVVQSLMNA
GIKLNPMMDVSRPGNLKSILCEGTDLDKYIRFSSTAEKVAFQNVSCSRTPQQLINAQQVL
LQNLDAGKVLSKVPSALNLNAALMGKTTQDALLVIEEMTRLQNSMILKAASSLDFQNDMI
GSLNRLLCENQPNTSSSLGRQMDNKKSVSITGNSSDAFCQTLVNTLEGTPGLRYIWNTFK
PLLQGKVLYTPDTPAVRLMMKEANSTFHALAMLKELADLWDELGPRVWDFLQNSSQVNSL
RALLANPVFAALLNQRLNGTQWTASLLANFLYNGPPKGRPPGLPPYDWRNAYNSTTGILK
LLSSFLGCLDLNKFEAAPTESRLVGRALELLQNGTFWAGVVFENLQPNSNQPPPYVRYKI
RMDIDDAERTNKVKERLWSPGARDNSFNDLRYIWGGFAYLQDMMDHGIIRVQTSKTQPLG
VFAQQMPYPCFVNDAFLRSLARSLPLYMTLAWIYSVAMIVKGIVAEKEARLKETVRIMGL
RSSIYWLSWAVSSVLPLAVSALLLALILKYGKVLQYSDPSVIFVFLLVFCLATISQCFLI
SVFFSKANLAAACGGLIYFVLYLPHILCYAWSDVMGFQAKVVVSLLSCVAFGYGCENFAK
YEQQGIGIQWYNIRKSPDDGERYSFVVSIIIMLFDAAFYWVLTWYIENVFPGQYGIPKPW
YFPFTASYWCGKATVTGVDHGLLKDSTVYNEYLEKPAPGMKAGVSIRNLVKIYKTGKKLA
VDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIHTDMDSIRKYL
GMCPQHNVLFNELTVEEHIYFYARLKGCSHNEVKHEMDQMIKDVGLPHKRKDLAKNLSGG
MQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWDLLLKYKQGRTIILSTHHMDEADI
LGDRIAIISHGKLRCCGSSLFLKKYFGSGYYLTLVREEAEKMTAQRNGIKHSQDKEEKDC
PSRDSSPDDGISSQSWDNSGHSADLTAVGQIVRCHVPEAVFLESIGQEITYILPYGGARD
GTFALLFQELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPTTKEVLVRDCKRS
SRTSKRNSIASVHMKTEQVSKMRELKEKFTSKVDDLKRIASVSGKGSMVITGWELIRRQF
LALFIKRFHHARRSRKGLIAQVVLPAAFVCLSLIFSLIVPPFTEYPSLELQPWMYGLPQT
TFYSKDTPDNVEVSKVVETLVNKPGFGTRCMNGDPIPKLPCSASGSEWVTPSVDQSVTDI
FLNGNWNMSNPSPSCKCSTPERTIMLPDCPPGAGGLPPPQRVQNTTDTLLDLTGRNVTDF
LVKTFERSGKTRYGGISVGAVNSQVRLTEAAIEASFRDLKNLFSSFQDNLTDRIFQNAET
LLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNAILRGNLPAGQDPRQYGITVSNHPLNLT
KEQLTSIAMAATSTDLVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPAVYW
LANFAWDMCNYIIPCLIVIVIFLCFQQKAYVSPPNLPALILLLILYGWSITPMMYPASFI
FSVPSTAYVVLTCINLFIGINGSIATFVMELINDDNISRINDIVKQVLLIFPHFCLGRGL
IDMAKNQATATLFSSFGEDRFKDPLSWDMVGKNLCAMSIQGAVMFAITILIQYKFFCKPR
LISGKPLSAEEEDIDVARERGRVYEGKAQSDLLRIYDLTKIYSGKSTPAVDRLCVGVPAA
ECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNLGYCPQFDAINE
LLTGREHLEFYARLRGVPEKEITMVAEWGIQKLGLVKYSNKPAGTYSGGNKRKLSTAMAL
IGCPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVN
GRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVQQSFPGSILKEKHHNTLQYQ
LPYIQGALANIFSQFTSHQQRLGVEDYAVSQTTLDQVFVNFAKHQQGEDDSKAYYNTVDT
SDELPLQSVKTFQEAEKV
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcaattcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagtgatatggcctctatttctcttcttcatactggtg
tgggtgcggtccaccaatgagccacttcatcaaggccaatgccactacccaaacaaagcc
atgccatcggctggcgtgctgccctggcttcaaggtatgatctgcaacgtcaacaatccc
tgtttaaactattccacaccgggggaggcaccaggccaagtcaacaacttcaacaactca
ataattgccgggatgttgatagagctgcaaaccctcctggtcaacagatctattctcagc
aaggcacagttgctggcagatgacctcgcccagtgggattcagtcctctcacagtctacc
cttggtaatgctcaaccaatgatcctaaggagtattctcagagacaatgaagctttctcc
acttacctgaaagagaatttgtcggttcaaccatcagtggtccaaagtctcatgaatgct
gggattaaactcaatccaatgatggacgtctcgaggccgggcaacctgaagagcatcctg
tgtgaggggacagatctggataaatatatccgatttagcagcacagctgaaaaggtggct
tttcaaaatgtcagctgctcccgcactccacagcagctgattaacgcccaacaagtactt
cttcaaaacctggatgcggggaaagtgctttctaaggtaccttcagctttgaatctgaat
gcagcactgatggggaaaaccactcaagatgcgttactagtgattgaggagatgaccagg
ttgcagaactccatgatccttaaagctgctagttcactggatttccaaaacgacatgatt
ggcagtttaaataggctactgtgtgaaaaccagcccaacaccagttcaagcttaggtaga
cagatggataacaagaagtcggtctccattacgggcaacagctccgatgctttttgtcag
actcttgtcaacaccctggagggcacacctggtctgcgctacatttggaacaccttcaag
ccgttattgcaaggcaaagtcctctacacacctgatacacctgctgttcgcctcatgatg
aaagaggcaaacagcacattccatgccttggctatgcttaaagagctcgctgatttgtgg
gatgaactagggccacgtgtctgggatttcctccaaaatagcagtcaagtcaattcatta
cgggctttgctggcgaatccagtgtttgctgctctcctcaaccagcgtctcaacggcaca
caatggacagcaagcctgctggccaacttcctgtacaacgggcctccaaagggtcgtcca
ccaggcctgccaccctatgactggcgaaatgcttacaactccactacagggatcctgaag
cttctctccagctttcttggttgtttagacctgaataagtttgaggcagcccccactgaa
agccgtctggtgggcagagcactggagcttctgcagaatggtacattctgggctggtgtt
gtctttgaaaacctccagccaaactccaaccaacctcctccttatgtcagatacaaaata
cgcatggacattgatgatgctgagcgtaccaacaaagtgaaagaaaggttatggtctccc
ggagctcgagacaactcctttaacgacctgcgctatatatggggaggcttcgcctacctg
caggatatgatggaccatggcattatacgagtgcaaacatcaaagacacaacccctgggt
gtttttgcccagcaaatgccatacccttgctttgtgaatgacgcgttcctccggtctctg
gcccgctccctccccttatacatgactttagcctggatctactcagtggcaatgatcgtt
aagggcatcgtcgcagagaaagaggcgaggcttaaggagacagtgaggatcatgggcctg
agaagttccatctattggctgagctgggcagtatcaagtgtgctgccgctggccgtcagc
gccctcctccttgcccttatactgaagtatggcaaggtgctacaatacagcgacccatca
gtaatctttgtcttcctgctggtgttctgcctagccaccatcagtcagtgcttcctcatt
agcgtcttcttctctaaggccaatttagcagcggcgtgcgggggactcatctactttgtc
ctctacctgccgcacatcctctgctacgcctggagcgacgtcatgggttttcaggccaag
gttgttgtgagtttgctgtcatgtgtggcctttggctatggctgtgaaaactttgccaag
tatgagcagcaaggcatcggtattcagtggtacaacatcagaaagagtccagacgatggg
gaacgctacagctttgtcgtctccatcatcataatgctctttgatgctgctttttactgg
gtgctcacctggtacatcgaaaatgtctttccaggacaatatggaattccgaagccatgg
tacttcccttttactgcatcttactggtgtgggaaagccacagtgactggcgttgaccac
ggcttgctgaaggactccactgtatataatgagtatctggagaaaccagcacctggtatg
aaagcaggggtttcaatccgcaatcttgttaaaatctacaagactggaaagaagctcgct
gtggatggactgagtatggacttctacgagaatcagatcacatcttttcttggccacaat
ggagccggaaaaacaaccacaatgtcaattctgacagggctgttcccacctacatcagga
acagcgctcatcaacggatatgacatccacacggacatggacagcatccgaaagtacttg
ggaatgtgcccacagcacaacgtcttattcaatgagttgacagtggaggagcatatctac
ttctacgccaggctgaaaggatgcagccacaatgaggtgaaacatgagatggaccagatg
ataaaggatgtcggtttaccacataagcggaaggatcttgctaagaacttgtcaggtggg
atgcagagaaagctgtctgtggctatagcatttgtcggcggctcaaaaatcgtcatctta
gatgaacctacagcgggagtggacccctatgcacgcaggggtatctgggacttgctgtta
aaatacaaacaaggtcgcaccatcattttgtctacacatcacatggatgaggcagacatc
ttaggtgatcgcattgctatcatctcccatggcaagctgcgttgctgtggctcctcactc
tttctaaagaaatattttggcagcggctactacctcactctggtccgagaggaggctgaa
aagatgacagctcaacgtaatggtatcaaacacagtcaggacaaagaggagaaagattgt
ccttcgagggacagcagcccagatgatggcatcagcagccaaagctgggacaactctggt
cattcagcagatttgacagctgtgggtcaaattgtgcggtgccacgtccctgaggcagtc
ttcttggagagcattggtcaagagatcacctacatactgccttacggtggagccagagat
gggacctttgcactgctgttccaagagcttgacctagccatggctgaccttggtctgact
agctacggcatctccgacaccacgctggaggagatatttcttaaagtggcagaagatacc
ggagtggatgcagaaataccaacaacaaaggaggtgttggtgagagactgcaaaagaagc
tcccgcacatccaagcggaacagcatcgccagcgtccacatgaaaacagagcaagtctct
aaaatgagagaattgaaggaaaaattcacaagtaaagtggatgacttaaagaggattgct
agtgtcagtgggaagggatccatggtcatcactggatgggagctgatcaggaggcagttc
cttgcgcttttcatcaagcgcttccaccacgcccgaaggagccgcaagggactcattgcc
caggtggtcctgcctgctgcgtttgtgtgcctgtctctgatcttctcgctcatcgttccg
cctttcactgaatatccgagtctggagctgcaaccctggatgtatggtctgcctcaaacc
accttttacagcaaagatacgcctgataatgtggaggtgtctaaggttgtggaaaccttg
gtaaacaagcctggctttggaactcgctgtatgaatggagacccaataccgaagttacca
tgttcagctagtggctctgaatgggtaactccatctgtggatcagtccgtcactgacatt
ttcctcaacggtaactggaacatgtccaacccttccccctcctgtaagtgcagcacacct
gaacggacgatcatgttacctgactgtccacctggtgcaggagggctccctccacctcag
agagtccagaacacaacagacacattgttggatttaactggacgtaacgtgacagatttc
ttggtcaagacttttgaacgctctggtaaaacaaggtacgggggcatctctgttggagcg
gtcaactctcaagtccgtctgactgaggcagcaatcgaagcttctttcagggatctaaaa
aacctattcagttcatttcaggataatctgactgatcggatcttccagaatgcagagaca
ctactaaagaagctgggaaccagggacaacgtaaaggtgtggttctacaaccaggcatgg
cacggcatggtgtccttcctcagtgtggccaacaacgccatcctgagaggaaatctgcca
gcaggacaggacccccgccagtatggcatcaccgtgtccaatcaccccctcaacctcacc
aaggagcagctcacctccatagccatggccgcaacctccaccgacttggtggtgtccatc
tgcgttatctttgccatgtccttcatccctgccagttttgtcctcttcctcatccaagag
agggtaaacaaagccaagcatctgcaatttgtcagtggagttaacccagctgtctactgg
ttggccaattttgcctgggacatgtgtaactacatcatcccatgcttgattgtgattgtg
atcttcctctgcttccaacaaaaagcctatgtttcacctcctaacctgcctgctttgatt
ctgctgctgattctgtatgggtggtccatcacccccatgatgtaccctgcctcctttatc
ttcagcgtgcccagcacagcctatgtggtgctgacctgcatcaacctcttcattggtatt
aacggcagcatagccacctttgttatggagctcatcaatgatgataatatctcccgcatc
aacgacatagtgaagcaggtgctgctgatattcccacatttctgtctcggcagagggcta
attgacatggccaagaaccaggcaacagccaccctgttcagcagttttggggaagaccgt
ttcaaagacccgctcagctgggacatggtgggaaagaacctctgcgccatgtccatccag
ggagctgtcatgtttgccatcacaatcctcatccagtacaaatttttctgcaagccaagg
cttatttcagggaagccattatctgcagaggaagaggatatcgatgttgctcgggaacga
ggacgggtttatgaaggcaaggcccagagcgaccttctgaggatctatgatctcactaag
atctactctgggaagagcacccctgccgtggacaggctatgtgtgggagtacctgccgca
gagtgtttcggcttgcttggaatcaacggggctggaaaaaccaccacgttcaagatgctg
acaggagacatcccagtctccggtggagaggccttcctaaatggatacagcataagaaca
gaaatgagggacgtgcaccagaacctgggctattgtccccagtttgatgctattaatgag
ctgctgactggtcgagagcatctggagttttacgccaggctacgaggggtaccagaaaaa
gagatcaccatggtggccgagtgggggatccaaaaattgggcctggtcaaatattccaac
aagccagcaggaacctacagcggtgggaacaaacgcaaactttctacagcaatggccctg
atcggttgtcctccagtgattttcctggatgagccaaccactgggatggaccccaaagcc
cgacgcttcctgtgggactgcatcttgagtgtcattaaagagggacgctcagtcatcctc
acatcacacagtatggaggagtgtgaagcactgtgcacacgcatggccatcatggtcaac
ggccgcttcaagtgcctcgggagcattcagcatttgaagagccgattcggagatggctac
acagtaattgtgagggttggtggctctcctcctgcattgaagccagttgaggactttgtc
cagcagtccttccctggcagtatcctgaaggagaagcatcacaacacactgcagtatcag
ctaccgtacatacagggagctttggccaacatattcagccagttcaccagtcatcagcag
aggctgggtgtggaagactacgctgtgtcccagaccacgctggatcaggtctttgtgaac
tttgcaaagcaccagcagggagaggacgactctaaggcctattacaacacagtggacact
tcagatgagctgccattacagtctgtgaagaccttccaagaggcagagaaggtgtaa
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integrated database retrieval system
