Etheostoma spectabile (orangethroat darter): 116707254
Help
Entry
116707254 CDS
T08457
Name
(RefSeq) trichohyalin-like isoform X1
Organism
esp
Etheostoma spectabile (orangethroat darter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AIG1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
116707254
NCBI-ProteinID:
XP_032400414
LinkDB
All DBs
Position
19:12860717..12870008
Genome browser
AA seq
2105 aa
AA seq
DB search
MDVTDENCSPGIVTNGDYPVRCTEEVLLHFFTDESLQAAMDSQHPTASRSTAPALPELRL
VLLGRKGAGKSAAGNTILGGVGGFECGKPTEECVKRRADVEGRKVTVVDTPGWEWYYPLN
STPNWVRRETLRSVSLCPSGPHAVLLVVRSCASVTDDYISEIEEHLEPLGKAVWEHTMLL
FTRGDELGLVSMEQRILTSGPALHRLLKKCENRYHVLDNRSKGDGTQVKELIRKLEEMVE
RKMDGSSHLEMDNTVLVGLEADGKRRARERRKKQRQMEMQMQRGTIKAALMSDGLQGSEL
DARQSFSKIPRRLTEVRLVLLGERETGKSSAGNTILGKIGSFQAGAVTEECVRQQAEVAM
RLVTVVDTPGWEGGVAGATPERVKREIVSSVSLCPPGPHALLLSLRVDTLVRAAHVREHL
ELLGEGVWRHTILLFTHGDQLREGVDIEQHIQGGGRDLQWLLEKCRGRYHVISSLDAGGR
GSEGSIKVTELLQKIEKMAAVNRCEAFSGLVQEVIDLSRHRNEKFNQRLKDMGDKMLRQE
EELKNIRDREMKRIRWFFDRKKKGKSPGKADTQREEEEEENRRLGERKNDGEVEGELEEK
MRWLTEDKEREIQDLSTENERIHVALTQSRRERDETMLRLEIKERETEELKERIDEQQLK
LLDLERASVANEYERKQREDTIKAKKQEWLSEVKKLENNIELLKKEKAEWMEKVDSLKVE
MDETKRHIDDMLERKEHERKREMADMEVKLLEKHKELDKTMKNASEEKQIAQAIMKQYEE
ATERKVEEIKSQHRKEMHDKEAEIQGIQLQHQEAMARKIREIEKMMETMKVQHQEEIVQK
LKDNAEVMERVKQQHDNEIKETQKEKQRMIADLKEQFAKESEEQMKVKKKEIAELVQRFL
AQTEEKMLENEKEKETIHLTYKKDMAQKMQEKEKEVEVLKLQHREEMARKMNEMEKRMEM
REAEHKEEIDKKVKAKEEAVEKVKQQYSRTIKDSEHETQRQIKELKEQFAEEIEKQLQER
QRQMRELEQKHITQTEVRALENKKEQKEMNENYEKYILQQMHEREGLIEKLKHQHINEIR
ETMQESDKEKEKLVMNLKKEMEQRLQEKDKEIDEIKGNVKEMKEQLQQKEEKELDHLNDK
HEMEQRVREKEKEIEGMKLNVKELNKKLQQNKEKELDHLNDKKDMEQRLEERQRETDMIK
EHLKELLNHKKQMEQKLQEKERMIEKLDQHVKDVDEILRRKEEERGEIILNQKKEAEQRL
QDREREMEEMKLQLLNDMERKLKEKETEIESVKQQADSREMGWREEQRKKDEKGENELSR
LLKIIDNKTNEIAQAECLLAERDSEIDEAKKTCANYLKEIEELNESNKNQTSSIMEIQQR
HAEQDRKKDAEMMAKLQEKEEELKQRERENEKETIQLKLTIEQTKSELKELISKMDKEMT
SMIQNYEKEIAGRNQSMESIAKEKECAIRRSEEGRRRVEELQEQNEKLRKETDNLKIKCE
ELKTESEEVRKDLRGYEQQVKSKEAEIQEILRERDVGVGELKEANDKLQVAIERMKERAG
EAENQMNELRVHVQKESEFRTKVEEFLKREKEIEEREQDLNRNKEELSKRGHELDAKEQE
LVEKEVKLESKGEELRKWEERQQKEQEDKDKNEHDVSIRVQNIKKKEQELESLLRALEGK
QKELSYHGQDLQEKVKGQKDHGKELKDKEYYLRNEEQELLNWKIELQMQNERVNSTTQQL
DEMGRDLALLKEELHNKENNLKELFKKLGKWEQNLKEREEGLLKRENGEYEVGYNVGAHE
GDSFDLTAVAESSEDDLHLMCREVSKRRGEGKGRESYRGEKDREDQRMKTASSAAESNNC
HLETMKEMEMSEEKEEMRGRGEETMKVKRREDMESAKVIGKFEFLSARQGHRSSNNKDLP
GSGLRVVVLGESWSSRSPAGVTILCGQEFKHDGSTFRPWRGQVAGRQLTVAEPLGLKWRD
GPGLTNATQRKSLLDSISWCHPGPHVVLLLIPAFLTCTQKYRRAIEEHMTLFGEDIWQRT
LVLFTWGEMLGESAEQHILRNGELMGLVERCGGRYHVLGSKKSPSLIERLLETMDNMVTV
NSREL
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgacagatgagaactgtagtccaggcatcgtcacgaatggtgattatccggta
cggtgcactgaggaagtacttctccatttcttcacagatgaaagtctgcaggccgccatg
gactcacaacaccctaccgcctcccgcagcaccgcgccggctctcccagagcttagactg
gtcctcctgggcaggaaaggagcaggaaagagcgcggcgggcaacaccatcctgggagga
gtagggggcttcgagtgcgggaagcccacagaggagtgtgtgaaaaggcgagctgatgtg
gaagggaggaaagtcactgtggtagacaccccagggtgggagtggtactacccgctcaac
agcacccccaactgggtgaggagggagactttacgaagtgtgtcgctttgcccttctgga
ccccacgctgtgctgcttgtggtgcgatcctgcgcttcagtaacagatgactacatcagt
gagatagaggaacatctggagccgctgggaaaagcagtttgggagcacaccatgttgctg
tttacccggggagacgagctaggcctggtgtcaatggagcaacgaatcctgacgagcggc
ccggcactccataggctcctcaaaaagtgtgaaaacagataccatgtcctggataaccgg
agcaaaggagatgggacgcaggttaaagagctgataaggaagctggaggagatggtggag
aggaagatggatggaagcagtcatttagagatggataatacggtcctggtgggtctggag
gcagacgggaagcggagagcaagggagaggaggaagaaacagaggcagatggagatgcag
atgcagagagggaccatcaaagctgctctaatgagtgatggtcttcagggttcagagcta
gacgcccggcagtcattctccaagattccccgacgtctgactgaggtcaggctggttctc
ctcggcgagcgtgaaacaggaaagagctctgccgggaacaccattctgggcaaaataggc
tccttccaggccggggcagtgacagaggagtgcgtccgtcagcaagcggaggtggccatg
cggctggtgacagtggtggacactcccggctgggagggaggtgtagcgggggccacacct
gagagggtgaagagggagattgtcagcagcgtgtccttgtgtcctccagggccccacgcg
ctcctgctgagtctgagggtggatacactggtgagggcagcacatgtgagggaacatctg
gagcttctgggcgagggtgtatggagacacacgatattgctgttcacccatggtgatcag
cttcgggaaggggtggatattgaacagcacatccagggtgggggcagggatctccagtgg
ctgctggagaagtgcaggggcaggtaccacgtaatcagcagcctagatgcaggaggaaga
ggaagtgaaggctccattaaggtgacggagctcctgcagaagatagaaaagatggcggcg
gtgaacagatgtgaggcattctccggcttagttcaggaggtcatagatctgagccggcac
aggaacgagaagttcaaccagcggctgaaggacatgggagataaaatgcttcgccaagag
gaggagttgaaaaatattcgagacagggagatgaaaagaatcaggtggttttttgacaga
aagaagaaggggaaatcacccggaaaagccgacactcaaagggaagaagaggaggaagag
aacaggaggttgggagaaaggaagaatgatggggaagttgagggggagctagaggagaag
atgcgatggctgacagaggataaagagagagaaattcaggatctgagtacagaaaatgag
agaatccatgtggcgctaacccagagcagacgagaaagggacgagacgatgctcaggttg
gagataaaagagagagagacagaggagctgaaagaaagaattgacgagcagcaactgaag
ctgctggaccttgagcgtgccagtgtagcaaatgaatatgagagaaaacagagggaggat
accatcaaagcaaagaagcaagagtggttgagtgaggttaagaaattagaaaacaacata
gagctgctgaagaaagagaaagcagagtggatggaaaaagttgattctttaaaagtagaa
atggatgagactaaaagacatattgatgatatgctcgagagaaaagaacatgaaagaaaa
agggagatggcagatatggaagtcaaactacttgaaaaacacaaagagctggataaaact
atgaagaacgcctcagaggaaaagcagatagctcaagccatcatgaaacaatatgaagaa
gctacggaaaggaaagttgaagaaataaaatcacaacataggaaagagatgcatgacaaa
gaggcagagatacaaggcatacaactgcagcatcaggaagcgatggccagaaaaatcaga
gaaatagaaaaaatgatggagacaatgaaagttcaacaccaagaagaaattgttcaaaag
ttaaaagacaatgcagaagttatggaaagagtcaaacagcagcatgacaatgaaataaag
gaaacacagaaagaaaaacaaagaatgattgccgacctgaaagagcagtttgcaaaagaa
tcagaggaacaaatgaaagtaaaaaagaaggagatagcagagttagtgcagaggtttctc
gcccaaacagaagaaaaaatgctggaaaatgaaaaagagaaggaaacgattcatctcacc
tacaaaaaagacatggcacagaagatgcaagagaaagaaaaagaggtagaagtgttaaaa
ctgcagcatcgggaagaaatggcaagaaaaatgaatgaaatggaaaaacgaatggagatg
agggaagcggaacacaaggaggaaattgataaaaaagtgaaagcaaaagaggaagctgtg
gaaaaggtcaaacagcagtacagtcgcacaataaaggactctgagcacgaaacacaacgg
cagattaaagagctgaaagaacagtttgcagaagaaatagagaaacaattgcaggaaaga
caaagacagatgagagagttggagcaaaagcacatcacccagacagaggtaagggcacta
gaaaataaaaaagagcagaaagagatgaatgaaaactatgaaaaatacattttgcaacaa
atgcacgagagagagggactaatcgagaagttaaaacatcagcacattaatgaaatcaga
gaaacaatgcaagaaagtgacaaagaaaaggaaaaacttgttatgaatctcaagaaagag
atggagcaaagactgcaggaaaaggataaagagatagatgagatcaaaggaaatgtgaaa
gaaatgaaggaacagctacaacaaaaggaagagaaagaactagatcatttaaatgacaag
cacgaaatggagcaaagagtgagagaaaaagaaaaagaaattgaggggatgaagctcaat
gtcaaagaattgaataaaaagctgcaacaaaataaagagaaagaactagatcatttaaat
gacaagaaagacatggagcaaagactggaggaaagacaaagagaaacagacatgataaaa
gaacatttaaaagaacttttaaaccacaagaaacagatggagcaaaaactccaagaaaaa
gaaagaatgatagaaaagttggatcagcatgtaaaggatgttgatgaaatcctgcggaga
aaggaagaggagagaggagaaattattctcaatcaaaagaaagaggcagagcagcgactg
caggacagagagcgagagatggaggagatgaaactgcagcttttaaatgacatggagaga
aaactcaaagaaaaagaaactgagattgaaagtgttaaacaacaggccgactcacgggag
atgggatggagggaagagcagaggaagaaggacgagaagggagaaaacgagttgagccga
ctgttaaaaatcattgacaataaaacaaatgaaatagcacaagcggaatgccttcttgcc
gagagagacagtgagattgacgaggcaaaaaagacatgtgcaaactacttgaaagaaatt
gaagagctaaacgaaagcaataaaaaccaaacctccagtatcatggaaatacagcagcgt
catgcagagcaggatagaaaaaaagacgctgaaatgatggcaaaacttcaggagaaagaa
gaagaactgaagcagagagagcgagaaaacgagaaagagaccatccaactgaagctaaca
atcgagcagacaaagtccgagctgaaggagctcatcagcaagatggacaaggagatgacg
agcatgattcagaattatgaaaaggagattgcgggaaggaaccagagcatggaatccatc
gcaaaggagaaggagtgcgcaataagacgttcggaggaaggtcggaggagagttgaggag
ttgcaggagcaaaatgagaagttgagaaaagagacggacaacctcaaaataaagtgtgag
gagctgaagacggagagcgaagaagttagaaaagatctcaggggatatgaacagcaggtg
aagagcaaagaagcagagatacaagaaattcttagggagagagatgtgggggtcggggaa
ttaaaggaggcgaatgacaaactacaggtagcgatagaaaggatgaaagagagagcgggt
gaggcagaaaatcagatgaatgagttgagagtgcatgtccagaaagagagtgagtttaga
acgaaggttgaggaattcttaaaaagggaaaaagaaatagaggaaagggagcaggatctg
aacagaaacaaagaagagttgagcaaacgaggacacgaacttgatgcaaaagagcaggag
cttgttgaaaaagaggtcaagttggaaagcaagggagaagaacttcgcaaatgggaagaa
aggcaacaaaaagagcaggaagacaaagataaaaacgagcatgatgtgagtataagagtg
caaaatatcaagaaaaaggaacaggagctagagagcttgctaagagctctggaaggcaaa
cagaaagagctaagctatcatggtcaagatcttcaggagaaggtaaaagggcaaaaagat
cacgggaaggagctgaaagacaaagagtattacctaagaaatgaagagcaggagttactc
aactggaagatagagttgcaaatgcaaaatgagcgtgtaaactctacaacgcagcagtta
gacgagatggggagagacttggctctgctgaaggaagaacttcacaacaaagagaacaat
ttaaaggagttatttaagaaattgggaaaatgggaacagaatcttaaagaacgggaagaa
gggttgctcaaaagagagaatggagaatatgaggttggttacaatgtgggagcccatgag
ggggattcttttgatctgacagctgtagccgagagctcagaagatgacttgcatttaatg
tgccgagaggtcagtaagagaaggggagaaggaaaaggaagagagtcatatagaggagaa
aaggacagggaggatcagaggatgaaaacagcatcgtcggctgcagagagcaataactgt
caccttgaaacaatgaaagagatggagatgtccgaggaaaaggaagagatgagaggaagg
ggagaagaaacgatgaaggtaaaaaggagagaggatatggaaagtgcaaaggtcattgga
aagtttgagtttttatctgcacgtcagggtcacagaagctcaaacaacaaagaccttcct
ggttcgggtttgagggtggtggtgttaggggagtcctggtcgtctcgctcccccgctgga
gtcaccatcctgtgtggacaggaattcaaacacgacgggtctaccttcaggccctggaga
ggccaagtagccggacgccaacttacagtcgcagaaccgctcggcctgaagtggcgagac
gggccgggtctgaccaacgcaacgcaaaggaaaagccttctcgacagcatctcctggtgt
caccctggacctcacgtcgtcctcctgctcattcccgccttcctcacctgcacacagaag
tacaggagagccatagaggagcacatgactttgtttggggaagacatttggcagcgcacg
ctggtgctgttcacatggggggaaatgttaggggagagcgcggagcagcacatcctgagg
aacggggagctaatggggctcgtagagagatgtgggggcaggtatcatgtgcttggcagc
aaaaaaagtccctctttgattgagagattgttggagacgatggataatatggtgactgtg
aatagcagagaactgtga
DBGET
integrated database retrieval system
