Eubacterium siraeum V10Sc8a: ES1_17500
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Entry
ES1_17500 CDS
T02589
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
esr
Eubacterium siraeum V10Sc8a
Pathway
esr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ES1_17500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
esr03400
]
ES1_17500
DNA repair and recombination proteins [BR:
esr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ES1_17500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ES1_17500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
ResIII
DEAD
Kinesin
AAA_30
AAA_22
DUF7037
Microtub_bd
DUF87
AAA_5
AAA_33
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CBL34678
UniProt:
D4MLP5
LinkDB
All DBs
Position
1902171..1903889
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AA seq
572 aa
AA seq
DB search
MDKFVLKSNYKPMGDQPQAIDSLANGVLDGDKEQVLLGVTGSGKTFTMANIIEKVNRPTL
ILAHNKTLAAQLCSEFKEFFPDNAVEYFVSYYDYYQPEAYIPSTDAYIEKDSAINDEIDR
LRHSATAALAERRDVIIVASVSCIYSLGSPEDYRENMLSIREGQERSRDDIIKRLVEIQY
ERNDMNFIRNKFRVRGDVLEVFPAGSTSDKAIRIEFFGDEIDRISEIDIVTGEVKRRFSH
VAIFPASHYIVSKARLENSLTEIENEMEERVKFFTDNHKLIEAQRIEQRTRYDMEMLREI
GTCKGVENYSRVLAGRAPGSSPITLMHHFPKDFLMFIDESHVTLPQVRGMYGGDFARKKN
LVDYGFRLPSAYDNRPMNFDEFTSMINQVIYVSATPGEYEKSHAVNTAEQVIRPTGLLDP
IIEIKPVAGQIEDLYSEINERTKKGECVLITTLTKKMAEDLTAYYEKLGVKIRYMHHDID
SIERMEIIRDLRMHVFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGR
AARNAEGQRSINVCRYGYGQYGKGSDRNQPPP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttcgtattaaaatcaaattataagccgatgggcgatcaaccgcaggctata
gacagccttgcaaacggtgtgcttgacggcgataaggaacaggttctgctcggagttacc
ggttcgggaaaaacctttactatggcaaatattatcgaaaaggtcaaccgacccacgctt
atccttgcgcataacaagacgcttgcggcacagctgtgcagtgagttcaaggagtttttc
ccggataatgctgtcgaatattttgtaagctattacgactactatcagcctgaggcgtat
attccgtcaaccgatgcctatatcgaaaaggacagtgcgataaacgatgagatagaccgc
ctgcgacactcggcaacagcggctcttgcggagcgcagggatgtaattatcgttgccagt
gtaagctgtatctacagtttgggcagtccggaggattaccgtgagaatatgctttctatc
cgtgagggtcaggaacgaagccgtgacgatataataaaaaggcttgtcgaaatacagtat
gaacgcaacgatatgaatttcatccgtaacaagttcagggtaagaggtgatgtgcttgag
gttttccctgccggaagtacatcggacaaggcgataagaatagaatttttcggcgatgag
atagacaggatatccgagatagacattgtgacaggcgaggtgaaacgtcgcttttctcac
gttgctattttccctgcatcgcattatattgtcagcaaggcaaggcttgaaaattcgctt
accgagatagaaaacgaaatggaagaacgtgtaaaattcttcaccgataaccataagctg
atagaggcgcagaggatagagcagagaacacgctatgatatggaaatgctccgtgagata
ggaacgtgcaagggcgttgagaactattcacgggtgcttgcaggaagagcgccgggcagc
tcgcctataactcttatgcaccattttccgaaagattttcttatgttcattgacgagagc
cacgttacattgccgcaggtaagaggtatgtacggcggcgactttgcacgaaagaaaaac
cttgtggattacggcttccgtctgccgtcagcgtatgataaccgaccgatgaattttgac
gagtttacctcgatgataaatcaggtcatttatgtttcggctacaccgggcgaatacgaa
aagagtcacgctgtgaacacagccgagcaggtcatacgtcctacgggtctgcttgatccg
ataatcgagatcaagcctgttgcgggacagattgaggatctttattccgaaataaacgag
cgtaccaaaaagggtgagtgtgtgcttatcactacgcttacaaagaaaatggctgaggat
ctgacggcttattacgaaaagctcggcgtgaagatacgctatatgcaccacgatattgat
tctatcgaacgtatggagataataagagatctgcgtatgcacgtctttgatgtgcttgtc
ggaataaatcttctgcgtgagggtcttgacttgccggaggtatcgcttgttgcgatactt
gacgcagataaagagggctttttacgaagcgaaacctcgcttatacagactataggcagg
gcggcaagaaacgccgaaggccaaaggtccataaatgtatgccgatacggttacggacag
tatggaaaaggcagtgaccgaaaccaaccgccgccgtga
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