Eubacterium siraeum V10Sc8a: ES1_22060
Help
Entry
ES1_22060 CDS
T02589
Name
(GenBank) DNA polymerase III catalytic subunit, PolC type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
esr
Eubacterium siraeum V10Sc8a
Pathway
esr03030
DNA replication
esr03430
Mismatch repair
esr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
esr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ES1_22060
03430 Mismatch repair
ES1_22060
03440 Homologous recombination
ES1_22060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esr03032
]
ES1_22060
03400 DNA repair and recombination proteins [BR:
esr03400
]
ES1_22060
Enzymes [BR:
esr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ES1_22060
DNA replication proteins [BR:
esr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ES1_22060
DNA repair and recombination proteins [BR:
esr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ES1_22060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
RecG_wedge
RNase_H_2
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CBL35055
UniProt:
D4MMS2
LinkDB
All DBs
Position
complement(2363818..2368635)
Genome browser
AA seq
1605 aa
AA seq
DB search
MAAILKEILDRVEMPQQTADARLLSILCDEADKSMILQLEADELIPYSVLAETGNAIKKY
LGVPSVKIYPKYAPELFSPSYLYDIIQILKPSHGVINGYMDDSEISDDGDTFEFTLMHGG
IDLLYSEKIDKEIEKFTKGVFSKSVTVKFSENATVGYADLDERYYEELSAQPLPDFDEID
RKAAERASESKSSRGKKSRPEPRKRPGKITLTYLEDKLNTDGLLYLGNEITEAPQSLKSL
GEESDSVTVWGELTDVEHKDTRNGVYTIITASLCDDTGRIPVKLFAKTEIIDDYDFLEDG
AVFVMHGSYKLDTFANEMQFNPTDIMQVSLRDDYTMKTPAPKPSSQGGNAPAAPAMTKAN
VFAEPEEMDLMFETTHFGSKAKLVMGKPINDAPVEMASIMTERDNVTVWGEIFNVEKKET
KSGKSTIITAAFSDRTSSMIMKLFVYNTKLDSYSFIQNGTKILANGSYKADDFLHCNCFN
PQSVMLVEVKPKQDNAPEKRVELHMHTNMSDMDAVTAPSVLVKQAHAWGHKAVAITDHGN
AQAYPEAMNTVEKINKDDPDFKVIYGLEAYFVNDGNAVVDGCDNVKIEDDIIVFDIETTG
LHPANERITEIGAVKLRNMEIVDRFSTFVNPMMPIPSNITELTGITDDMVADAPTEDVAV
SDFMAFCGNSPVCAHNAKFDVSFIRSAAARMEKSFDNPVVDTLSIAKAALKGIKNYKLDT
IAKYFKLGDFDHHRAVADAEMLCMIYMHIVNDTRKTAKLEYIGDFNTAFGSVDIKKLPTY
HQIILVKNKVGLKNLYRLISASNLDYFYKKPRIPKSLLSQYREGLIIGSACEAGELFRAI
LEKESQEKIEEIASFYDYLEIQPIGNNMFLLRNGKVSSEEDLRDLNRAIVQLGDRLGKPV
VATCDVHFKDPEDAVFREVLQAGQGYEDFANQPPLYFRTTDEMLEEFAYLGEEKAKEVVI
TNTNRIADMIEVVRPIPTGTYTPHIDGADEELQQLCWDRAHAWYGDDLPETVEKRLKKEL
DSIIKHGFAVLYMIAQKLVAFSEKNGYLVGSRGSVGSSVVAIMAGISEVNPLPPHYRCPK
CRHNEFILDGSYGSGFDLPPKKCPNCDIDMIRDGHDIPFETFLGFDGDKSPDIDLNFSGE
VQGKVHRYTEELFGKDHVFKAGTISAVQEKTAEGFVRKWLEKKGMTANSAEISRLAAGCT
GVKRTTSQHPGGMVVVPSDYEVYDFTAVQHPADKTESDMITTHFDFHALHDTILKLDELG
HDVPTLYKHLEDMTGIKIADVPTSDPKVMELFTSTEPLGIKEEDLGVSSGTYGIPEFGTP
FTLQMLKDAQPKKFSDLLQISGLSHGTDVWLGNAQDLISDGTCTISEVIGCRDDIMVYLM
HQGLEPKLAFKIMEITRKGNAKKLFNEDIYKAFEENNVPQWYIESCKKIKYMFPKAHAAA
YVTGAVKLCWFKVYYPSEFYSAVLTKHTENIDVKTVLGGKESVRNKIQLIQSNPEATAKD
KGMLDALLLIYEMMLRGITFLPVDYKKSRATTYAIEDGNLRLPFLAVEGCGENAAIKLKE
VIDKGDFICLEDIQAQSGINSTVLSKLYDMNVFGDLPQSAQISFF
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atggctgccattttaaaagaaattcttgacagggtcgaaatgcctcagcagacagcggac
gcacgactgctgtcgatactgtgtgacgaagcggataagagcatgatacttcagcttgaa
gcggatgaactgataccgtacagcgtgcttgccgaaacgggcaatgcaataaagaaatat
ctaggtgtgccgtcggtaaagatttatccgaaatatgcgcctgagctgttcagcccgtca
tatctttatgacattattcagatattgaagccgtcacacggcgttataaacggatatatg
gacgattccgagataagcgacgacggagatacatttgagtttacgcttatgcacggcgga
attgaccttctgtacagcgagaagatagacaaggaaatagagaagttcacaaagggcgta
ttctcaaagagcgtaacggtaaaattcagcgaaaatgcgacagtaggttatgcagacctt
gacgaaagatattatgaggaattgtcggcacagccgcttccggattttgatgagatcgac
agaaaagcggcagagcgtgcaagcgagagcaaaagctccagaggtaagaaatcaagaccc
gagccgagaaagcgtccaggcaagataacgcttacatatcttgaggataagctgaacacg
gacggacttttatatctcggaaacgagataaccgaagctcctcagtcgctgaagtcactg
ggcgaagaaagcgacagcgttacggtatggggcgagcttaccgatgttgagcataaggat
acaagaaacggcgtttatacgataattacggcatcgctttgtgacgatacaggcaggata
cctgtaaagctgttcgctaagaccgagattatcgacgattacgattttcttgaagacggt
gcggtttttgttatgcacggcagttataagcttgacacattcgcaaatgagatgcagttc
aatcctactgatataatgcaggtttcactgcgtgatgattacactatgaaaacacctgcg
ccaaagccttcttcacagggaggaaatgcgcctgccgctcctgcaatgacaaaggcaaac
gtgtttgcagagcctgaggaaatggatctgatgtttgaaacaactcatttcggaagcaag
gcaaaactcgtaatgggcaagcctataaatgacgctcccgttgagatggcaagcataatg
acggagcgtgacaatgttaccgtatggggtgagatcttcaacgttgaaaagaaagaaaca
aaaagcggaaaatcaacgataatcacagccgcattcagcgacaggacttcatctatgata
atgaagctgtttgtttataatacaaagcttgacagctacagctttattcagaacggtaca
aagatacttgcaaacggcagttataaggctgacgattttctgcactgcaactgctttaat
ccgcagtcggtaatgcttgtcgaggtaaagccgaagcaggacaatgctcccgaaaagaga
gtagagcttcatatgcatacaaatatgtcggatatggacgcagttacagctccgtcagtg
cttgtaaagcaggctcacgcatggggccacaaggcggtagctataaccgaccacggcaac
gcacaggcatatcctgaggctatgaataccgttgagaagataaacaaggacgatcccgac
ttcaaggtgatttatggtcttgaggcatactttgtaaatgacggaaacgcagttgttgac
ggatgtgacaatgtaaaaatcgaggacgatataatcgtatttgacatagaaacaacggga
cttcaccctgcaaacgagcgtataaccgaaataggtgcggtaaagctgcgtaatatggag
atagttgaccgtttttctacttttgtaaacccgatgatgccgataccgtcaaatatcacg
gagcttacgggtattacggatgatatggtagccgacgctccgaccgaggatgttgcggta
agcgactttatggctttctgcggcaattctccggtctgcgcacataacgcaaagtttgac
gtgtcatttatcagaagtgccgccgcaagaatggaaaagagctttgataatcctgtagtc
gatacgctgagtattgcaaaggcggcactcaagggtatcaagaactataagcttgatact
atagcaaaatatttcaagctgggcgactttgaccatcacagagcggttgcggacgcagaa
atgctgtgcatgatatatatgcacatagtaaacgatacaagaaagaccgcaaagcttgaa
tatataggcgacttcaacacggcattcggaagtgtggatataaagaagctccctacttat
caccagataattcttgtaaagaacaaggtcggtctgaaaaatctgtacagacttatttcc
gcatcgaaccttgattatttctacaaaaagccgagaataccgaaatccctgctgtcgcag
tacagagagggacttatcataggaagtgcgtgcgaggcgggcgagcttttcagggcgata
cttgaaaaggaatcgcaggagaagatagaggaaatcgcatcgttctatgattatcttgag
atacagcctatcggcaataatatgttccttctgagaaacggcaaggtaagcagtgaagaa
gatctgagagatctcaaccgtgctatagtgcagcttggtgacaggctcggaaagccggta
gtagctacctgtgatgtgcatttcaaagaccctgaggacgctgtattccgtgaagtgctg
caggcaggacagggctatgaggacttcgcaaatcagccgccgctttatttcaggactacc
gatgaaatgcttgaggaattcgcttatctcggtgaagaaaaggcgaaggaagtcgttatt
acaaacacgaacagaatcgccgatatgatcgaggtggtacggcctatccccacaggcaca
tatactcctcatattgacggtgcagacgaagaattacagcagctttgctgggacagagca
cacgcatggtacggtgacgatctgccggaaacagttgaaaagcgacttaagaaggaactt
gactctatcataaagcacggattcgccgtactgtatatgatagcgcagaagctggttgcg
ttctcggaaaagaacggttatcttgtcggctcacgaggctcggtaggttcatcggtagtt
gccataatggcaggtatctctgaggtaaacccattgcctccgcactacagatgccccaag
tgccgacacaacgaatttatccttgacggctcatacggctcgggctttgacctgccgccg
aaaaagtgtcctaactgcgatatagatatgatccgtgacggtcacgatataccgtttgaa
acgttcctcggatttgacggcgataagtcgcctgatattgaccttaacttctcgggcgag
gtacagggaaaggtgcatagatacacagaagaactgttcggtaaggatcacgttttcaag
gcgggtactatctccgccgtgcaggaaaagactgcggaaggctttgtacgcaagtggctt
gaaaagaagggtatgacggcaaattccgccgaaatatcacgtcttgcggcaggctgtaca
ggcgttaagagaacaacgtcacagcatcccggcggaatggtcgttgtaccgagcgattat
gaggtttatgactttacggcggttcagcacccggcggacaagacggagagcgatatgatc
acaacgcacttcgacttccacgcactgcacgatactatacttaagctcgacgaactcgga
cacgatgtgccgacgctgtataagcaccttgaagatatgacgggcataaagatagcggat
gttccgacaagcgatcctaaggtcatggaactgttcacatcgacagagccgctcggcata
aaggaggaggatctcggcgtttcaagcggtacatacggtatccctgaattcggtacgccg
tttactttgcagatgcttaaggacgcacagccgaagaaattctccgaccttttacagatc
tcgggtctgtcgcacggtactgacgtatggctcggaaacgcacaggatcttatctctgac
ggaacctgtacgatttcagaggttatcggatgccgtgacgatattatggtttaccttatg
catcagggtcttgagccgaagctcgcattcaagataatggagataacccgtaagggtaat
gccaagaagctgttcaacgaggatatatacaaggcgtttgaagaaaacaatgtaccgcag
tggtatattgaaagctgtaagaagataaagtacatgttccctaaggcacacgccgccgct
tatgtaaccggtgctgtaaagctgtgctggttcaaggtctattatccgtcggaattctat
tctgcggtacttacaaagcacactgaaaatatagatgtaaagaccgttctcggcggtaag
gagagcgtaagaaacaagatacagcttatccagtcaaacccggaggctactgcaaaagac
aagggtatgcttgacgcactgctgctgatatatgagatgatgctcagaggtatcacgttc
ctgcctgttgattataagaagtcgagggcgacaacttatgcgatagaggacggaaacctc
cgtctgccgttccttgcggtagagggctgtggtgaaaacgccgcaatcaagctcaaggaa
gttatcgacaagggagatttcatctgccttgaggatattcaggcacaatcaggtataaac
agcaccgttctcagcaagctgtatgatatgaatgtattcggggatctccctcaatccgca
cagatctcattcttctaa
DBGET
integrated database retrieval system
