Enterococcus silesiacus: ATZ33_03015
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Entry
ATZ33_03015 CDS
T04218
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ess
Enterococcus silesiacus
Pathway
ess03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATZ33_03015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ess03019
]
ATZ33_03015
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_03015
Enzymes [BR:
ess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATZ33_03015
Messenger RNA biogenesis [BR:
ess03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATZ33_03015
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATZ33_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Acid_PPase
Cyclin_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ALS00382
UniProt:
A0A0S3K7Y1
LinkDB
All DBs
Position
654676..656460
Genome browser
AA seq
594 aa
AA seq
DB search
MIDIKDLLKEKFGYDEFRHGQEEIINHVLHKENVLGIMPTGGGKSICYQLPALMLENLTL
VISPLISLMKDQVDALNMMGIPATFINSTISQQEMNTRVQMAVNREVKLLYVAPERLESF
DFQQLLLHVPIDLLAVDEAHCISQWGHDFRPSYLRLAEIIEQFQQQPAVIALTATATPQV
AEDILQQLHIPKENHVQTGFARENLSFQVVKDQNRDVFLLEYLKLNQGQSGIVYASTRKE
VERIYHLLQSKKITVGMYHGGMNEKERNHNQEQFLFDKLQVMVATNAFGMGINKSNVRFV
IHAQIPGNIESYYQEAGRAGRDGLPSDAVLLYAPQDLQIQQFFIDQSEMTIDYKQKEYMK
LREMSQYANAQMCLQKFILRYFGEKGHDCGRCSNCLDERELVDITVDVQKVLSCVKRMGE
KFGKGLVGKVLTGSKDQKIDQWHFNRLPTYGLMKDRTQKEVNQLIDYLTAERYLNPSDGQ
YPLLSVSPTGVQVLLGQQTVFRKEDQRVRKVVVNDGLFETLRELRMDLAQEAGVPPYLIF
SDSTLKEMCEKLPKNSIQLLQVKGVGQNKLDKYGEKFLAAIELFKQSEEKDASN
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatcaaagacttactaaaagaaaaatttggatacgacgaatttcgtcatgga
caagaagaaattatcaatcatgttttacataaagaaaatgttttaggaatcatgcctaca
gggggcggtaaatcaatttgttatcaattacccgcacttatgctggagaatcttactttg
gttatttcgccgttaatctctttgatgaaagaccaagttgatgcactaaatatgatggga
atcccagcgacatttatcaacagcactatttcccaacaagagatgaacacacgcgttcaa
atggcagttaaccgcgaggtcaagctattatatgtggcacctgagcgtttagaatccttt
gattttcaacaattattattacatgtgccaattgatttattagcagtcgatgaggcacat
tgtatctcgcaatgggggcacgattttcgtcctagttatctgcgcctagctgaaattatc
gaacaattccagcaacagccagcggtgattgcattaactgctacagcaacaccccaagtg
gcagaagatatcctgcaacaattacatattccaaaagagaaccatgtgcaaactggcttt
gctcgtgagaatctatcattccaagtggtcaaggatcaaaatcgagatgttttcctttta
gaatatctaaagctgaatcagggacaatcaggtattgtttatgccagtacaagaaaagaa
gtagaacgaatctatcatttgcttcaaagtaagaaaataaccgttggcatgtatcacggt
gggatgaatgaaaaagaaagaaatcataaccaagagcagtttttattcgataagttacaa
gtgatggttgcaacgaatgcatttggtatgggaatcaataaaagtaatgttcgttttgtt
atccatgcccagatccctgggaatatcgagtcttattaccaagaagctgggcgcgctgga
cgtgatggacttcctagtgatgctgttttactatatgcaccacaagatcttcaaatccag
caattttttatcgaccaatccgaaatgacgatcgattataaacaaaaagaatatatgaaa
ttaagagaaatgtcccaatatgcaaatgctcaaatgtgtctacaaaagtttattttgcgc
tactttggagagaaaggacatgattgtgggcgctgttccaattgtttagatgaaagggaa
ttagtggatatcactgtagatgttcaaaaagttttatcttgtgtaaaacgcatgggagaa
aaatttggtaaggggctagttggaaaagttttgacaggttcaaaagatcaaaaaatcgat
cagtggcattttaatcgtctacctacctatggattgatgaaagatcgaacgcaaaaagaa
gtcaatcaactaatagattatttgacagctgaaagatatttaaacccatcagatggtcaa
tatccattattgtcggtttcgccaacaggggttcaagttcttttaggccagcaaacagta
tttagaaaagaagatcagcgtgttcggaaagttgtagtcaatgacggcctcttcgaaaca
ttaagagaattacggatggacttagcacaagaagcaggtgtaccgccatatctgattttc
tcagatagtaccttgaaagagatgtgtgaaaaactccctaaaaattcaattcaattattg
caggtaaaaggtgtaggacaaaataaattagacaaatatggcgagaaattcttggcagca
attgaactatttaaacaatcagaagaaaaagatgctagtaactag
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