| Entry |
|
| Name |
|
| KO |
|
| Organism |
ess Enterococcus silesiacus
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:ess00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATZ33_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ess03019]
ATZ33_03780
03009 Ribosome biogenesis [BR:ess03009]
ATZ33_03780
Enzymes [BR:ess01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ATZ33_03780
Messenger RNA biogenesis [BR:ess03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATZ33_03780
Ribosome biogenesis [BR:ess03009]
Prokaryotic type
rRNA helicases
ATZ33_03780
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
821769..823217
|
| AA seq |
482 aa
MDKRDFVDNRLSDVIIKAVADLGYDTPTAVQQAVIPAVLDGKDVLVQSQTGSGKTASFGI
PLCEKVEWTENKPQVLVLEPTRELAQQVQEDLINIGRYKRIKATAVYGKASYIKQKSELK
QKSHIVVGTPGRVLDHVIKGSLPLEKINCLVIDEADEMLNMGFIDQVKEIIAALPKNKNT
LLFSATMPKVIEQMSRSYLHEPTVIKIAATEKTTPKIQHAFLDVTETNKMAALEAVTIVE
NPDTCIIFGNTQEKVNDTYDFLVEAGYPVGKLHGGMMQEDRFEVMDAFRKGKFRYLVATD
VAARGIDIENITHVINLDVPFEKESYIHRVGRTGRAGKEGFALTFVTPKEETLKKEIEHF
ADLSMTRITLPNAKLVARSKSAFEAKITTRQKPKHQKAKRLNEEITKVYFNGGKKKKLRA
LDFVGTISKIDGVASEDIGIITIQENVTYIDILNGKGQLVIQAMKERTIKGKQLKVHVAR
KK |
| NT seq |
1449 nt +upstreamnt +downstreamnt
atggataaaagagattttgttgataataggttaagtgacgtaatcataaaggctgtagcg
gatttagggtatgatacaccgactgcagttcaacaggcagttattccagctgtcttagat
ggaaaagatgttttagttcagtctcagactggtagtggaaaaactgctagttttggtatc
ccactttgtgaaaaagtagaatggactgaaaataagccgcaagttcttgtattagaacct
accagagaactagcacaacaagtccaagaagatttgattaatattgggcgctataaacga
atcaaggcaactgcagtgtatggaaaagcatcgtatatcaaacaaaaatcagaattaaaa
caaaaaagccacatagtagtagggacaccagggcgagtactggatcatgtcatcaaaggg
agtcttcctcttgaaaaaatcaattgtttagtgattgatgaagcagatgaaatgctaaat
atgggttttatcgatcaagtaaaagaaattatcgcagctctacccaaaaataagaatacc
ttgttattctctgcgacgatgccaaaagttattgagcaaatgagtcgctcgtatttgcat
gaaccaacagtaataaaaatcgcagctacagaaaaaacaacgccaaaaattcaacatgct
tttttagatgtcactgaaactaataaaatggctgctttagaagcggtgacgattgttgaa
aatccggacacttgcattatttttgggaatacacaagaaaaagtcaatgatacgtatgat
ttcttggttgaagcaggttatcctgttggcaaattgcatggtgggatgatgcaagaagat
cgttttgaagtaatggacgcttttagaaaaggaaagtttcgctatcttgtagcaacagac
gtagcagctcgtggtatcgatattgaaaatatcacgcacgtcatcaatttagatgttccg
tttgaaaaagaaagctacatccatcgtgtaggtcgaacaggtcgagctggaaaagaaggg
tttgctctaacatttgtcacaccgaaagaagaaacgctaaaaaaagaaatcgaacatttt
gccgatctgagcatgacgcgaatcacattgccaaatgccaaactagttgcgagaagtaag
tcagcatttgaggcaaaaataacaacaagacaaaaaccaaaacaccaaaaagctaaacga
ttaaatgaagaaatcacaaaagtttacttcaatggcggtaagaaaaagaaattacgagcg
cttgattttgttggaactatttccaaaatcgacggtgtcgcttcagaggacatcgggatc
atcaccatacaagagaacgtgacctatatcgatattttaaatggaaaaggtcaacttgtc
attcaagcaatgaaagaacgaacgatcaaaggcaagcaattgaaagttcatgttgctaga
aaaaaataa |