Enterococcus silesiacus: ATZ33_04205
Help
Entry
ATZ33_04205 CDS
T04218
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ess
Enterococcus silesiacus
Pathway
ess03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATZ33_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ess03019
]
ATZ33_04205
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_04205
Enzymes [BR:
ess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATZ33_04205
Messenger RNA biogenesis [BR:
ess03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ATZ33_04205
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ATZ33_04205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
AAA_30
Cas3-like_C_2
Sulfolobus_pRN
KANSL3_1st
DUF6866_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALS03266
UniProt:
A0A0S3KG61
LinkDB
All DBs
Position
904499..905935
Genome browser
AA seq
478 aa
AA seq
DB search
MDLEQRLFENFGFHTFKPGQKAVIEHLLKKQDTLAVLPTGTGKSLCYQFVGQMIEGTVLI
VSPLLSLMEDQVTQLQKKGETRVIALNSSLSFLEKQYVLAHLSEYKFVLISPETLTQKEV
RHKIASLKIALFVIDEAHCVSQWGVDFRPEYTKLAGIQEECGYPLTLALTATATPAVKKE
ILQQVFTQRKEISEVIFSVDRPNIGLIVEQIAEKDDRLISYLTQLRNKGIIYCATRKTAE
KIHRLIKDTTNVKSAFYHGGLTANERSLLQQQFVSNQLDVLCATNAFGMGIDKPDVRFVL
HYDCPDSLENYVQEIGRAGRDGQASLAILLYQKGDESIHYYFQSESRLDRELLNELNVNN
LQKHENLLPELNEIQQKWLQGYLEKEYTIEELEQRLLRKEKERQQQLSVMLNYINEEKCR
RTFIQQYFSEKIDQTKQENCCDRCGLSFDNYKEQIVQSPEENEISEQWEDILIRLFKE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggatttagagcaacgactatttgaaaattttggttttcacacatttaagccaggtcaa
aaagctgtcatcgagcatctgttaaaaaagcaagacacactagcggttttgcctacagga
acgggaaaatctttatgttatcaatttgttggtcaaatgatcgaaggaactgtgctgatt
gtttccccattattatcattaatggaagaccaagtgactcaactacaaaaaaagggtgag
acacgagtaatcgcattaaatagtagcctgtcttttttagaaaagcaatatgtattagct
catttaagcgagtataagtttgttttaattagtccagaaaccttgacacaaaaagaggtc
agacataaaatcgccagcttgaaaattgctttgtttgtaatagatgaagctcattgtgtg
tcccaatggggcgtcgattttagaccagaatataccaagttggctggaatacaagaagaa
tgcggttatccattgactctggcattgacagcaaccgcgacgcccgccgtaaaaaaagag
atacttcagcaagtatttacgcagcgtaaggaaatttctgaagtgattttctcagtcgat
cggccgaatattggtttgattgtggaacaaatcgcggaaaaagatgataggttgatttct
tatctgacacaactacgcaataaaggcatcatttattgcgcaacaagaaaaacagctgag
aagatccatcgattaatcaaagatacgacaaatgtaaaatcggcattttaccatggcggt
ttaacagcaaatgaacgcagtcttttacaacagcaatttgtctcgaatcaattagatgtt
ttatgcgcaacaaatgcttttggtatggggatcgataaaccagatgtacgttttgtgctt
cactatgattgccctgatagtctagaaaactatgttcaagaaattggtcgtgcagggcgc
gatgggcaagcaagtttagcgattttgctttatcaaaaaggggatgaatccatccattac
tactttcaatcagaaagtcgtttggatcgagaacttttaaatgagctgaatgtcaacaat
ttgcaaaaacacgaaaatttattacctgaattaaatgaaattcaacaaaaatggctacaa
ggatacttagaaaaagaatacacaatcgaagagttggaacagagattattaagaaaagag
aaagaacgtcagcagcagttaagcgttatgttaaactatattaacgaagaaaagtgccgt
cgtacattcattcagcagtatttttcagaaaaaatagatcaaactaaacaagaaaattgt
tgtgatcgatgcggcttatcctttgacaattacaaagagcaaatagtacaatcaccagaa
gaaaacgaaatctccgaacaatgggaggacattttgataagattatttaaagaatga
DBGET
integrated database retrieval system
