Enterococcus silesiacus: ATZ33_05020
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Entry
ATZ33_05020 CDS
T04218
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ess
Enterococcus silesiacus
Brite
KEGG Orthology (KO) [BR:
ess00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ess03400
]
ATZ33_05020
Enzymes [BR:
ess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATZ33_05020
DNA repair and recombination proteins [BR:
ess03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATZ33_05020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ResIII
DEAD
PDDEXK_1
AAA_30
AAA_22
AAA_16
AAA_12
DUF2059
Motif
Other DBs
NCBI-ProteinID:
ALS00752
LinkDB
All DBs
Position
complement(1082034..1085834)
Genome browser
AA seq
1266 aa
AA seq
DB search
MSKTIPLRPENEQFTDNQWQAVFDGDENILVSASAGSGKTTVLVRRVIEKLKSGVDIDRL
LIVTYTEAAAKEMKERIQSALQKAISNESEQERKQHFIRQLSLLPTANISTLHAFCLTVI
RRFYYLIEMDPVFRLLTDETEMLLLKEDVWDELREQFYAEDQESFYQLTSNFSNDRSDDG
LTRLIFSLYEFARANPDPDEWLLHLADSYRVTGQLGDSMLFQEYLKPQLMESLLRCVARY
EEMIRLTEGEEKLEKIAILARNEKEFVENFSSQLADNDLESGFEISKTVTFERYPTVRVE
DLKETAAQAKNLREQNKKAINDIITNLFTLSPQEMKDILAQSLPVVEEMARVGKAFIERY
SEQKLRKGLVDFNDLEHFTLAILAHKEAGKWFATEASKYYRDKFDEVLVDEYQDINRLQE
TILYWLRRPSAEEGNLFMVGDVKQSIYSFRLADPTLFIEKYNQYGQNKEGKRIVLAENFR
SRKNVLDFTNLVFEQLMDERVGQIDYDEAAQLVHGFDQFAEAENYDTELLIYEKKSEQLE
ETLKTDDSQLILEDKTEGELHMTALKIRELIDQQFLIYDKSTKENRPLTYKDIVLLTPTK
KNNLTILEIFKLAGIPIQVNDAQNYFQATEVQTMVALLQIIDNPYQDIPLAAVLRSPIVG
LKENELVMIRLAAKKSSYYEAFLQFNQNDATTKEQQTVQEKTTQFAKKLDQWRELARRNQ
LATLIWQIYQDTAYLDYVGGMPAGKQRQANLFALVDRAANYEQTSFRGLFQFVRFIEKMQ
EKDKDLAEPVILSDENAVRVMTIHASKGLEFPVVFVLDMTKEFNLGDLNDRYIFDDRLGV
GIRYLDQGDRMLYETLPFLAIKQAKLKKLLSEEMRKLYVALTRAEQKLYLIGSYNNQEAT
WKEWLKVSDVQTKVLPSENRLQGKSSLMNWVGMSLIRHHKMSEFQTEHITERIAGITQHP
AGFGISFMAEKEIQEQFAALQFIETSSVNEESFGSNDPKLTKRGLERLNYVYPYQLSTIT
TNYQSVSEIKRIFEDPDNKEIAKIELDDKNTIQPTPMIIHRMSEGELGKPRFIETIRKPS
ALEIGTATHYLLQLLDLTIEPTKDNILQLIDELIQTKIIKENVAKQIKIEQVLSFYQTSL
GQQLLTKSAQVVREQPFSMLLKAEELIKDYPRETEDDLLIHGMIDGYIEQEENCILYDYK
TDFVQDIENDQEIKKIIQRYRGQLNLYRKALVQATGKQVTQVLLVLLSAGIIIDMDAGQI
IEKMKK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagacgattcctttacgtccagaaaacgaacaatttactgataatcagtggcaa
gctgttttcgatggagatgaaaatattttggtttctgcctcagcgggttctggaaagacc
acagttctggtacgccgagtaattgaaaaactcaaaagtggtgtggacattgatcgttta
ttgattgtgacctatacagaagccgctgctaaagaaatgaaggaaagaatccaaagtgct
ttacaaaaggcgatttcaaatgagagcgaacaagagcgcaagcagcattttatcagacaa
ttatcactactccctacggctaatattagtacactgcatgctttttgtttaactgtgatt
cgtcgtttttattatttgattgaaatggatccagtgtttcgtttattgacggatgaaact
gaaatgctgcttttaaaagaggatgtttgggatgagcttagagaacaattttacgcagaa
gaccaagaatctttctatcaattgacaagtaatttctcaaatgatcgcagtgatgatgga
ctgactcgactaattttttctctttatgaatttgcccgtgcaaatcctgatccagatgaa
tggctgttacatctagctgatagctatcgtgtaacaggacagttaggtgattcaatgtta
tttcaggaatacttaaagccgcagctcatggaaagtttactccgttgtgtagctcgttac
gaagaaatgatccgcctgaccgaaggagaagagaaactagaaaaaatcgctattcttgct
agaaatgaaaaggaatttgttgaaaatttcagtagtcaactggcagataatgatttggaa
tctggatttgaaatttcaaaaacggtgacctttgaacgttatcccacagttcgtgtcgag
gatttaaaagaaactgcggctcaagcaaaaaatctacgcgaacaaaataagaaagcgata
aatgatattataacgaacttatttactttatcaccgcaggaaatgaaagatatcttagcg
caatccttaccagtagtagaagaaatggccagagtcgggaaagctttcattgaacgttac
agcgaacaaaagcttagaaagggattagttgacttcaacgatttagagcacttcacgcta
gcgatcctagctcataaagaagctgggaagtggtttgccacagaagcgtccaagtattac
cgcgataaatttgatgaagtgttagttgatgaatatcaagacatcaatcgcttgcaagaa
acgatcctttattggcttagaagaccatcagctgaagagggaaatttatttatggtgggg
gatgttaaacaatctatttattccttccgtttagctgatccaacgttgtttattgaaaaa
tacaatcaatatgggcaaaataaagaaggaaaacgaatcgttttagctgagaatttccgc
tctagaaaaaatgtcttagattttaccaatttagtttttgagcagctgatggatgaacgg
gtgggacaaatcgattatgatgaagcggctcaactggttcatggatttgatcaatttgct
gaggctgaaaattatgatacagaactgctgatctatgaaaaaaaatcagagcagctggaa
gaaacacttaaaacagatgattctcaactgatcttagaagataaaactgaaggcgaactg
catatgacagcgttgaagatcagggaactgatcgatcagcagtttttgatttacgacaag
tctacgaaagaaaatcgtccgctgacttataaagatattgttttattgacaccgactaag
aaaaataatttgaccattctggaaatattcaaattagctggaattccgattcaagtcaat
gatgcgcaaaattatttccaagcaacagaggttcagaccatggtggcgcttttgcaaatc
atcgataacccttatcaggatattccacttgcagctgtgttacgttcgccgatcgtgggt
ttgaaagaaaacgaattggttatgatccgtttagctgctaaaaaaagttcttattatgaa
gcttttttgcagttcaatcaaaatgatgctacaacaaaagagcagcaaacagtacaagaa
aaaacgacacagtttgcgaaaaaactagaccaatggcgggaactggctagacggaatcaa
ttagccacgttaatttggcaaatttaccaagatactgcgtatttagattatgtggggggc
atgccggctggtaaacaaagacaggcgaatttattcgcgcttgtggaccgagcagccaat
tatgagcaaactagcttccgcggattatttcagtttgtgcgttttattgaaaaaatgcag
gaaaaagataaggatttagcggaaccagttattttaagtgatgaaaatgcagttcgggta
atgacgattcatgctagtaaaggcctagaatttccagtagtattcgtgttggatatgaca
aaagaattcaatcttggtgatttgaatgaccgctatatatttgatgaccgcctaggcgtg
ggaattcgttatcttgaccaaggggaccggatgttatatgagacattaccttttttagcg
ataaagcaagcaaaattaaaaaaattactttctgaagaaatgcggaaactatatgttgct
ttgactcgggcagaacaaaaactttatttaattggctcttacaataatcaagaagcaact
tggaaagagtggctaaaagtcagcgatgttcaaacaaaagtgttacctagcgaaaatcgg
ctgcaaggcaaaagcagcttgatgaactgggtcggaatgagtttgatccgtcatcacaaa
atgtcagaatttcaaacagaacatatcacagagagaattgcaggaatcacacaacatcct
gcagggtttggcatcagttttatggctgaaaaagagatccaagaacagtttgctgcactt
caatttattgagacaagctctgtaaatgaggaaagttttggaagtaatgatccaaagtta
accaagcgaggacttgaacgcttaaactatgtgtatccatatcagctttcaacaataacg
accaattaccaatctgtatctgaaattaagcggatttttgaagatccagacaataaggaa
atcgctaaaatcgagcttgatgataaaaatacaattcagccaacaccgatgatcattcac
cgaatgagtgaaggagaattaggcaaaccaagattcattgaaaccattcgcaaaccatcg
gcattagaaattggaacagcaacacattatctattacagcttttggacctaactatagaa
ccgacaaaagacaatattcttcaattgatcgatgagctgatccaaacaaaaatcatcaag
gaaaatgtagcgaagcagatcaagattgaacaggttctttctttttatcaaactagccta
ggtcagcaactattgactaaatctgctcaagttgtccgcgaacaaccattttcgatgtta
ttaaaggcagaagagctcattaaagattaccctagagagacagaagacgatctattgatt
cacggaatgattgatggctatatcgagcaagaggagaactgtattctctatgattacaaa
acagatttcgttcaagatattgagaacgatcaagagatcaagaaaatcatccaacgctat
agaggccaacttaatttgtaccggaaagcgttggttcaggctactggcaagcaagtaact
caggtcttgttggtgttattatctgcaggaatcattattgatatggatgctgggcaaatt
atagaaaaaatgaaaaaatga
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