Echinicola strongylocentroti: DN752_00375
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Entry
DN752_00375 CDS
T05506
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
est
Echinicola strongylocentroti
Pathway
est02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
est00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DN752_00375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
est03021
]
DN752_00375
Transcription machinery [BR:
est03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DN752_00375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_28
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AWW28714
UniProt:
A0A2Z4ICX3
LinkDB
All DBs
Position
complement(82695..83558)
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AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTADEEVVLAKRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQRFEREPSPEELAEVLEVTAGEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDGEEKPDDGLMNDSLRKEVQRALSTLTQREADVITLYFGL
NGEHAMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKTLKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcttaaaattagcaaacagatcacaaatcgagagagtcaatcgctcgataaa
tatttacaagagattggtaaagtagacctacttacagcagatgaagaggtggtacttgcc
aagagaatccgagaaggtgatcaacttgctcttgaaaaattaacaaaagcaaacttgagg
tttgtggtgtctgtggccaaacaataccaaaatcaaggtttgtcattgggtgatctaatc
aatgaaggaaacttgggccttatcaaggctgcacaacgctttgatgagaccaggggcttt
aaatttatctcttatgcagtttggtggatccgtcaatccattctgcaagcattggcggag
caatccagaattgtgaggttgccgctcaatagagtaggctccctgaacaagatcagtaag
actttcagtgagctggaacagcgttttgagcgtgagccatctccggaagaacttgctgaa
gtactggaagtcaccgctggagaagtcgtggatacgatgaagatctctggtcgtcacgtg
tccatggatgctccttttgtacaaggcgaagaaaatagccttttggatgtattggagaac
gatggcgaagagaagccagatgacgggttgatgaatgattctttgagaaaagaagtacaa
cgtgctctttcgacgctgacacagcgggaagccgatgttatcacgctttatttcggcctt
aatggtgaacatgccatgacattggaagagataggtgaaaaatttaacctcaccagagaa
cgggtacggcagatcaaagaaaaagccatcaggagattacgacatacttcaagaagtaaa
acgttgaaaccttatttgggataa
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