KEGG   Echinicola strongylocentroti: DN752_00705
Entry
DN752_00705       CDS       T05506                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
est  Echinicola strongylocentroti
Pathway
est02020  Two-component system
Brite
KEGG Orthology (KO) [BR:est00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DN752_00705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:est03021]
    DN752_00705
Transcription machinery [BR:est03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DN752_00705
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Sigma70_r2 HTH_24 GerE HTH_11 HTH_10 UPF0122 HTH_DeoR HTH_23 HTH_5 G6PD_N HTH_20 MarR_2 HTH_AsnC-type MarR Fe_dep_repress HTH_36 HTH_40 HTH_17 HTH_38 HTH_IclR
Other DBs
NCBI-ProteinID: AWW28770
UniProt: A0A2Z4ID84
LinkDB
Position
complement(179222..179800)
AA seq 192 aa
MDSCHKTDTTLLDELRLGSWEAFEELYERYWEKIFLVSRSFTKDEELSKDFVQEIFLDLW
NRREKLQIKNLYAYLYQASKYRLMDHIRKLEQQEHFIDEFNHILVDSPIEDLLHYKELDA
RIKECLEALSPKCKRIFYLSRYDHLSNQEIAQQLKISKSTVENQINKALNHLRNSPEVKM
AFIIAASLADTF
NT seq 579 nt   +upstreamnt  +downstreamnt
atggacagctgtcataaaacagacaccacgctattagacgagttaaggttgggatcttgg
gaggcctttgaagagttatatgaacgttactgggaaaaaatttttctagtgagcaggtcg
tttaccaaagatgaagaactcagcaaagatttcgtccaagaaatctttttggatttgtgg
aatagaagggaaaaactccaaatcaaaaacctgtatgcttacctgtaccaggcctccaaa
taccgattgatggaccatatccggaaactagagcagcaggagcattttatagatgaattt
aaccatatccttgtggacagtcccattgaggatttattgcattataaagagctagacgct
agaatcaaggagtgcctggaagcactgtcccccaagtgtaagaggattttttacctcagc
cgatacgatcacctctccaatcaggaaatcgcccaacaactgaaaatttccaaaagtacc
gtagaaaaccagatcaataaggcgctgaaccatctcagaaattctcctgaggtgaagatg
gcatttatcattgccgcttccttggccgatacgttttag

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