Echinicola strongylocentroti: DN752_00705
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Entry
DN752_00705 CDS
T05506
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
est
Echinicola strongylocentroti
Pathway
est02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
est00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DN752_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
est03021
]
DN752_00705
Transcription machinery [BR:
est03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DN752_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Sigma70_r2
HTH_24
GerE
HTH_11
HTH_10
UPF0122
HTH_DeoR
HTH_23
HTH_5
G6PD_N
HTH_20
MarR_2
HTH_AsnC-type
MarR
Fe_dep_repress
HTH_36
HTH_40
HTH_17
HTH_38
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AWW28770
UniProt:
A0A2Z4ID84
LinkDB
All DBs
Position
complement(179222..179800)
Genome browser
AA seq
192 aa
AA seq
DB search
MDSCHKTDTTLLDELRLGSWEAFEELYERYWEKIFLVSRSFTKDEELSKDFVQEIFLDLW
NRREKLQIKNLYAYLYQASKYRLMDHIRKLEQQEHFIDEFNHILVDSPIEDLLHYKELDA
RIKECLEALSPKCKRIFYLSRYDHLSNQEIAQQLKISKSTVENQINKALNHLRNSPEVKM
AFIIAASLADTF
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggacagctgtcataaaacagacaccacgctattagacgagttaaggttgggatcttgg
gaggcctttgaagagttatatgaacgttactgggaaaaaatttttctagtgagcaggtcg
tttaccaaagatgaagaactcagcaaagatttcgtccaagaaatctttttggatttgtgg
aatagaagggaaaaactccaaatcaaaaacctgtatgcttacctgtaccaggcctccaaa
taccgattgatggaccatatccggaaactagagcagcaggagcattttatagatgaattt
aaccatatccttgtggacagtcccattgaggatttattgcattataaagagctagacgct
agaatcaaggagtgcctggaagcactgtcccccaagtgtaagaggattttttacctcagc
cgatacgatcacctctccaatcaggaaatcgcccaacaactgaaaatttccaaaagtacc
gtagaaaaccagatcaataaggcgctgaaccatctcagaaattctcctgaggtgaagatg
gcatttatcattgccgcttccttggccgatacgttttag
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