Echinicola strongylocentroti: DN752_10065
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Entry
DN752_10065 CDS
T05506
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
est
Echinicola strongylocentroti
Pathway
est00260
Glycine, serine and threonine metabolism
est00630
Glyoxylate and dicarboxylate metabolism
est00670
One carbon pool by folate
est00785
Lipoic acid metabolism
est01100
Metabolic pathways
est01110
Biosynthesis of secondary metabolites
est01200
Carbon metabolism
Module
est_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
est00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DN752_10065 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DN752_10065 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DN752_10065 (gcvP)
00670 One carbon pool by folate
DN752_10065 (gcvP)
Enzymes [BR:
est01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DN752_10065 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
AAA_14
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AWW30439
UniProt:
A0A2Z4II74
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All DBs
Position
complement(2588801..2591695)
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AA seq
964 aa
AA seq
DB search
MKIDLTPTVKFEDRHNGPSTNDVSEMLTKIGAASIDELIDQTIPKAIQLDHPLNLPEAKS
EATFLKDFRKMAAKNKIYKSFIGLGYYDTITPGVILRNVLENPGWYTAYTPYQAEIAQGR
LEALVNFQTMVMDLTGMELANASLLDEGTAAAEAMNMLFATRPRDKKKATKFFVDEKVFI
QTKEILKTRALPIGVTLVEGPLHKLNLEDPELYGVLLQYPNADGEAINYKALIETAKENS
VTTAFSADLLALTLLTPPGEMGADVVVGTTQRFGVPMGYGGPHAAYFATKDTYKRQVPGR
IIGISVDRDGNKAYRMALQTREQHIKRERATSNICTAQVLLAVMAGMYAVYHGPKGLKDI
ALKIHGLAKLTAQGLAKLGFEQENENYFDTLKIKVDDVKQSKIKAFALSHEMNFRYEPGY
VYLAFDEAKTVEDVQEIIEVFARTTHSSADVVDLGSMVAHLSFEVADGLKRTSDYMGHMI
FNAFHSEHEMLRYIKRLENRDLSLVHSMISLGSCTMKLNATAEMIPVTWPEFGQLHPFVP
QDQAAGYYALFQDLRNWLSEITGFAETSLQPNSGAQGEFAGLMVIRAYHESRGESHRNIA
LIPSSAHGTNPASAVMAGMKVVIVKCDDKGNIDLGDLKEKAEKHKDNLSSFLVTYPSTHG
VFEEAIREMCQIVHENGGQVYMDGANMNAQVGLTSPGVIGADVCHLNLHKTFCIPHGGGG
PGMGPICVAKHLEEFLPSSPLVKTGGQQPISAISAAPFGSASILPISYAYIAMMGREGLK
HATQTAILNANYIKARLGEFFPTLYTGAQGRAAHEMIVDFREFKAVGVEVEDIAKRLIDY
GFHSPTVSFPVAGTMMIEPTESESKAELDRFCDALISIRGEIREIEEGKADPENNVLKNA
PHTAGMVMSDDWDLPYSREKAVYPLDYVKNSKFWPTVRRIDSAYGDRNLVCSCIPTEDYE
EASI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgatttgacccccaccgtgaagtttgaagatcgccataacggcccctccacc
aacgacgtgtcggagatgctcacgaaaatcggtgctgccagcattgatgagctgatcgat
caaaccatccccaaagccattcaactggatcatcccctcaacctgcctgaggcaaagtca
gaagcgacgtttctgaaggatttccgcaagatggctgccaagaacaaaatttataagtca
tttatcggtttgggctattacgataccattacgcccggggtgatattgagaaatgtactc
gaaaacccagggtggtacacggcttatacgccctatcaggcagaaatcgcccagggaaga
ttggaagcactggtgaatttccagaccatggtgatggaccttaccggcatggagctggcc
aatgcctccctactggatgagggcacagcagctgccgaagcgatgaacatgctgtttgct
acccggccgagggacaagaaaaaagccacgaaattttttgtggacgagaaggtgtttatc
caaaccaaagaaatccttaaaaccagggcacttccgattggcgtgaccttggtggagggg
ccattgcataaactgaacttggaagacccggagctttacggtgtactgcttcagtaccca
aatgctgacggggaagccatcaattataaagctttgatagaaacagccaaggaaaacagt
gttacgactgctttctcggccgacttacttgcccttacgctgcttacccctccgggggaa
atgggagctgacgtggtcgtcggtaccacccagcgatttggtgtgcctatgggatatgga
gggcctcatgccgcttattttgccaccaaagatacttataaacgtcaggtgcctggccga
atcatcggtatttcggttgatagggatggcaacaaggcgtacagaatggccctgcagaca
agggaacaacacatcaagcgtgaaagagccacctccaatatctgtaccgcacaggtgcta
ctggccgtgatggcaggaatgtacgccgtgtatcacggaccaaaaggactaaaagacatt
gccttaaaaattcacggattggccaagctgaccgctcaggggttggccaagttgggtttt
gagcaagaaaatgaaaactacttcgacacccttaagatcaaagtggacgatgtgaagcag
tccaagatcaaggcttttgcgctgtcgcatgaaatgaacttccgctacgagccagggtat
gtttatttggcatttgatgaagccaagacggtagaggatgttcaggagatcattgaggta
tttgcccggacgacacactcaagtgccgatgtggtggacttggggtccatggtagcccac
ctcagttttgaggtagccgatggcctgaaaaggacctccgactatatgggccatatgatc
ttcaatgcgttccactcagagcacgagatgttgcgttatatcaagcggttggaaaacagg
gacctgtcactggtgcattccatgatctcgctgggctcatgtacaatgaagctaaatgcg
accgctgagatgattccggttacttggccagagtttggtcagctgcatccatttgtgcca
caagaccaggcagcaggctactatgcgttgttccaggatctgagaaattggctgtcagag
attaccggttttgccgaaacttcccttcagcccaactcaggagcacagggggaatttgcc
ggattgatggtgatacgcgcttatcacgaaagcaggggcgaaagccaccggaatattgct
ttgatcccttcatctgcccacggtaccaaccccgcctctgccgtaatggccgggatgaaa
gtggtgatcgtcaagtgtgatgacaagggaaatatagaccttggcgacctgaaagaaaaa
gcggaaaagcataaagataacctgtcgtccttcctagtgacctatccatccacccacggg
gtatttgaagaggccattcgcgaaatgtgccagatcgttcatgagaatggcggtcaggtg
tatatggacggagccaatatgaatgcgcaggtagggctcaccagcccaggtgtcatcggt
gccgatgtgtgccacctcaatctccacaaaaccttctgcatccctcacggtggcggtggt
ccaggtatggggccgatctgtgtggccaagcacttggaggagtttttgccgagtagcccg
ttggtgaagacaggaggccaacagcctatttctgcgatttcggctgcgcctttcggtagt
gccagcatcttgccaatttcctatgcttacatcgccatgatgggcagggaaggcctgaag
catgccacccaaacggccatccttaacgccaactatatcaaagcgcgacttggtgaattt
ttcccgacactttacacaggtgcccaaggaagagcggctcacgagatgatagtggatttt
agggagtttaaagcagtaggtgtagaggtagaagacattgccaagcgattgatcgactat
ggcttccattcaccgaccgtttctttccctgtggcgggtaccatgatgatcgagccgacc
gaatcagaaagtaaggccgaactggataggttctgtgacgcactgatctccatccgtggc
gaaatccgcgagatcgaggaaggtaaagctgaccctgaaaacaatgtactgaaaaatgca
ccacatacggccggtatggtgatgagtgatgactgggacctgccttacagcagagagaaa
gcagtatatccactggactacgtaaaaaacagcaagttctggccaaccgtcagaaggatc
gattctgcttacggtgacagaaacttggtctgcagttgcattcctacagaagattatgag
gaagctagtatttag
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