Echinicola strongylocentroti: DN752_10905
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Entry
DN752_10905 CDS
T05506
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
est
Echinicola strongylocentroti
Pathway
est03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
est00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN752_10905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
est03021
]
DN752_10905
03019 Messenger RNA biogenesis [BR:
est03019
]
DN752_10905
Transcription machinery [BR:
est03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DN752_10905
Messenger RNA biogenesis [BR:
est03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DN752_10905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
Mor
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AWW30590
UniProt:
A0A2Z4IIS3
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All DBs
Position
2829010..2830830
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AA seq
606 aa
AA seq
DB search
MYNIEELKIRLLSELKEIAEDLGVKNYKSLKKDDLIYAILDQQAITPEKALPKKKPSKAE
KTSPDSTPEKEPAAEPAKATTEEQKESKPKFKRQNVADSKKGEATKEPPKPTKKPKEDTK
PAPKEKRERKNEAPKAENKPEGKTESKAESKPENKPESKPEPKQEKSSNDDNRPRGFRPR
RKAVVDEVAQRVATERPQEAEADLPRRKNIKEVSDEPSQPTTGNSRKKYASLVKEFDGII
ENEGVLEIMSDGYGFLRSLDYNYLASPDDIYVSPSQIKLFGLKTGDNIKGQIRPPKEGEK
YFALLKVSSVNGKTTEEIRDRIPFEYLTPLFPEERLNLTTRADNFSTRIVDLFAPIGKGQ
RGMIVAQPKTGKTVLLQKVANAIAENHPECHLMILLIDERPEEVTDMARSVKAEVISSTF
DEQAERHVKVSSMVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGGVDAN
ALHKPKRFFGAARNVENGGSLTIIATALVETGSKMDEVIFEEFKGTGNMELSLDRKLSNR
RIYPAIDVPGSGTRREDLLMEREEMQRIWILRKLMSDMTSQEAMEFLLQRMKGTRDNAEF
LISMNG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtataatattgaagaactaaaaattagactgctatccgaactgaaggagatagcagaa
gacctcggggttaaaaactacaaatccctaaagaaggacgatctcatctatgcgatctta
gatcagcaagctatcacccctgagaaagcccttccaaagaaaaaaccttccaaagctgaa
aagacttccccggacagtacccccgaaaaggagccagcagcagaaccagcaaaggcgacc
actgaggaacaaaaggagtcaaagcctaaattcaaacgccaaaacgtcgctgattccaaa
aagggagaagcaaccaaagagcctcctaaacctaccaaaaagccgaaggaagacaccaag
cccgctcctaaggagaaaagggaacggaaaaacgaggcgcctaaggccgaaaacaaacct
gaaggcaaaacagaaagtaaagctgaaagcaagcctgaaaacaagcctgaaagcaaacct
gaacctaagcaggagaaatcaagcaacgacgataacagacctaggggattcagaccgaga
agaaaggcagtagtagatgaggtggcacagcgagtggccactgaacgtccccaagaagct
gaagcagaccttcccagaagaaaaaacattaaagaggtatcagatgagccttcccaaccg
accactggaaatagcagaaaaaagtatgcttctttggtgaaggaatttgatggaattata
gaaaacgaaggagtactggagatcatgtctgacggatatggctttttaaggtcactggac
tataattacctggcctctccagacgatatttatgtatcaccttcccagatcaagcttttt
ggcctgaagacaggcgataatattaaaggccagatcaggcctcccaaggaaggagaaaaa
tattttgcccttctcaaagtatcttccgtaaatggcaagaccactgaggagattcgtgac
aggataccatttgaataccttaccccattatttcctgaagaaagattaaacctgaccacg
cgagcggacaatttctccactcgaatcgtagacttgtttgctcctatcggaaaaggacag
cggggcatgatcgtagcccagccaaaaacaggtaagaccgtcttgcttcagaaagttgcc
aatgccatagccgaaaatcatccagagtgtcacttaatgatcttattgatcgacgagcga
cctgaagaggtgacggacatggctcgttcggtaaaagcagaagtgatttcttccactttt
gacgagcaggccgagcgccatgtaaaagtatcttccatggtactggaaaaagccaaaaga
atggtagaatgcggccatgacgtggtcatcctattggactccatcacacgacttgccagg
gcctacaatactgtagtgccatcttctggaaagatcctttcaggtggtgtggatgccaat
gcgcttcataagccgaagaggttcttcggtgctgccagaaacgtggaaaatggcggctca
ctaaccatcattgccactgcactggtagaaactggctccaaaatggatgaggtgatcttt
gaggaattcaaaggtactggcaatatggaactgagcttggacagaaaactctccaacaga
aggatctatcctgccatcgatgtccctggatcaggtacacgaagagaagacctgctgatg
gaaagagaagagatgcaacgtatctggatcttgagaaaactcatgtccgacatgacttct
caagaagccatggaattcttgctccagcgaatgaaaggcacaagagacaatgccgaattt
ctgatcagcatgaacggataa
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