Echinicola strongylocentroti: DN752_11570
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Entry
DN752_11570 CDS
T05506
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
est
Echinicola strongylocentroti
Brite
KEGG Orthology (KO) [BR:
est00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
est03009
]
DN752_11570
Enzymes [BR:
est01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
DN752_11570
Ribosome biogenesis [BR:
est03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DN752_11570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AWW30713
UniProt:
A0A2Z4IJZ8
LinkDB
All DBs
Position
complement(2985808..2986539)
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AA seq
243 aa
AA seq
DB search
MEKDTVRINKYLSEIGYCSRRAADKLLEEGRITINGQVPELGTKVSPGDEVRVNGQLVSP
PKEDFIYIAFHKPVGIVCTTDTKREKDNIIDYINYPKRIFPIGRLDKPSEGLIFLTNDGD
IVNKILRAKNHHEKEYVVTVDKPISLAFIHKMANGVPILDTVTKECKVEQIGKRKFKIIL
TQGLNRQIRRMCTHLGYEVTKLKRIRIMNVQLDTPVGKWRYLTAEELAEINHQVAGSSKT
FEG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagacacggtaaggatcaataaatacttaagtgaaattggctattgctccaga
agggctgctgataagctgctagaggaaggccgcattaccatcaatggccaagttcccgag
ctggggaccaaggtaagccctggtgatgaggtccgtgtcaatggccagctagtgtcaccg
ccaaaggaggattttatctatatcgcctttcacaaacctgtgggcattgtttgcaccacc
gataccaaaagagaaaaggacaatatcatcgattatatcaactaccccaagcggattttt
cccattggcaggcttgacaagcccagtgaagggttgatatttcttaccaatgatggtgat
attgtgaacaagatcctgcgtgccaaaaaccaccatgaaaaggaatacgtcgtcacggtg
gataagcccatcagcctagcgtttatccacaaaatggccaatggcgttcctatcttggac
accgtcaccaaggagtgcaaggtggagcagatcggtaagcggaagtttaagatcatcctt
acacaaggccttaaccggcaaatcagacgaatgtgtacccacttgggatacgaagtcacc
aagctaaagcgtatccggatcatgaatgtccaactggatacccctgtcgggaaatggcgc
tacctcacagcagaggaacttgctgagatcaaccaccaagtggccggttcgagtaaaacg
tttgaaggttga
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