Echinicola strongylocentroti: DN752_12550
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Entry
DN752_12550 CDS
T05506
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
est
Echinicola strongylocentroti
Brite
KEGG Orthology (KO) [BR:
est00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
est03019
]
DN752_12550
03009 Ribosome biogenesis [BR:
est03009
]
DN752_12550
Messenger RNA biogenesis [BR:
est03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DN752_12550
Ribosome biogenesis [BR:
est03009
]
Prokaryotic type
rRNA processing factors
DN752_12550
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DnaJ_CXXCXGXG
DUF5351
FliT
Motif
Other DBs
NCBI-ProteinID:
AWW30890
UniProt:
A0A2Z4IJM0
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Position
complement(3229512..3231083)
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AA seq
523 aa
AA seq
DB search
MSTELVIDSAQNGSRIALLKNKGLVELHSDEESNQFKVGDMYLGTVRKIVNGLNAGFIDV
GYEKDAFLHYQDLGPKVKSLIKYTKQIRNNHNQQPTLKGFQLEPEIEKLGKISQVLSKNN
QILVQVVKEPISTKGPRLSCELSLAGRYLVLVPFSNAVNVSKKIRKAEERRRLARLITSI
KPDNFGVIIRTVAEGQSVTELDKDLRNLVDSWEDGMKKLMKAKSKDKVIGEMSMASSIVR
DLLNESFDAITVEDELIYDQIRSYIRSIAPEKEKIVKLYNGKAKLFESFGIEKQIKSLFG
QSVSLPHGGYLIIEHTEALHVIDVNSGNKSNQESDQEMTALKTNLVAVKEIARQLRLRDM
GGIIVIDFIDMKKADNKRTVYEAMKTAMKDDRSKNTILPLTKFGLMQITRQRVRPEVNIV
TKETCPSCNGTGKIQASILVADKLERDLEYTAVHQNLPKIKIGLHPYLHAYFTQGMMSKR
MKWFFKYFKWVKLIKDSSLPVTEYKFLDETGEEIELNIKDGAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacggaattagtaattgattctgctcaaaacggtagtcgcatagcccttttgaag
aacaaaggactggtagagcttcattccgatgaagaaagcaaccagttcaaagtaggggac
atgtacctgggaacggttcgtaagatcgtcaatggcctaaatgcgggattcattgatgtg
ggatacgaaaaggatgcatttttgcattaccaggacttggggccgaaagtgaaaagcttg
atcaaatacaccaaacagatcaggaacaatcacaatcagcaacctaccctcaaagggttt
caactagaacctgagatagaaaagctgggaaagatttcccaagtcctttctaaaaataac
cagatattagttcaggttgtaaaggagccgatctcaacgaaaggcccacgactatcctgt
gagctctccctcgccggtcgctacttggtattggtgcctttttcgaatgcagtcaacgta
tccaaaaagatccgtaaggctgaagaaagaagaaggcttgccagactgattacttccatc
aagcccgataattttggggtcattattagaacagtcgctgaaggccaatcggtcacagag
ctggacaaagacctcagaaatctagtagactcttgggaagatggaatgaaaaagctcatg
aaagccaagagcaaagacaaggtgataggagaaatgagtatggcaagctccattgtgaga
gacctgctcaacgaatcattcgatgcaatcacggtagaggatgaattaatctatgatcag
attcggtcttatatcagatcgatcgcccctgaaaaggaaaaaattgttaagctttacaac
ggaaaagctaagctctttgaaagttttggaattgaaaagcagataaaaagtctctttgga
cagtcggtgagccttccgcatggaggctacctgattatcgaacacaccgaagcgctgcac
gtcatcgatgtgaacagtggaaacaagtccaatcaagaaagtgaccaggaaatgacagca
ttaaaaaccaacctggtcgccgtaaaagaaattgccagacagcttcgccttagggatatg
ggaggcatcattgtcattgactttatagacatgaaaaaggccgataacaaacggactgtc
tatgaagccatgaaaacagcaatgaaagatgaccggtccaaaaacaccatactgccactg
accaagtttggtctaatgcagattacccggcagcgtgtaagaccagaggtcaatattgta
acaaaagaaacctgtccgtcttgtaatggtacaggcaaaatccaggcctccatcctggta
gctgataaattggaaagagatcttgagtacactgctgtacaccaaaacttgccaaaaata
aaaataggtttacacccttatcttcatgcctactttacccaaggcatgatgtcaaaaagg
atgaaatggttttttaaatatttcaaatgggtaaaactgatcaaagattcttcattacca
gtgacggagtataaattcctggacgaaacaggagaagaaatagaacttaatataaaagac
ggagccgaataa
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