Echinicola strongylocentroti: DN752_15770
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Entry
DN752_15770 CDS
T05506
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
est
Echinicola strongylocentroti
Pathway
est03030
DNA replication
est03430
Mismatch repair
est03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
est00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DN752_15770
03430 Mismatch repair
DN752_15770
03440 Homologous recombination
DN752_15770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
est03032
]
DN752_15770
03400 DNA repair and recombination proteins [BR:
est03400
]
DN752_15770
Enzymes [BR:
est01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DN752_15770
DNA replication proteins [BR:
est03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DN752_15770
DNA repair and recombination proteins [BR:
est03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DN752_15770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AWW31463
UniProt:
A0A2Z4IM56
LinkDB
All DBs
Position
complement(4049279..4053565)
Genome browser
AA seq
1428 aa
AA seq
DB search
MYIIFDTETTGLPRNYNAPITDLDNWPRLVQLAWQLHDERGKLISNQNYIVKPEGFTIPY
NAEKVHGISTDRALKEGHDLKKVLEIFHKDVEKATYLVGHNIGFDINVCGAEFLRVDLPM
QLLEKQELDTKDISTDFCAIPGGKGGKYKWPTLTELHQKLFGVGFEDAHDAAYDVDATAK
CFFGLITAEVQPPVDGLTVEDVIYEPPKLDAANFAAAKDQQKEAAQDVIKQARKADITNL
VDIPFSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKEAMSND
IKPVVGCEFNICRDHQNKSQKDGGFQTVLLAKNKAGYHNLAKLASFAYTQGFYYLPRIDK
ELLVQYKGDIIATTGGLWGEIPFLILNVGETQAEEAFVWWKEQFGEDFYVELNRHGIPEE
EKVNEVLLRFAQKYDVKYFAANSTYYNTKNDAKAHDILLCVKDGEKVDKPKRYIGKKGRE
FRYGFPNEEFYIKTPEEMKKLFADLPEAIECTNEIIEKVEAYKLERDVLLPKFNIPERFQ
DPQDDEDGGKRGENAFLRHLTYEGAKRRYPEITEEIRERLDFELSIIANTGYPGYFLIVQ
DFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPIAYDLLFERFLNPDRVSLPDIDID
FDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSDADRLAKLVPD
IKLKALFGLANDRAKLADKLKNNSENIDKAYELINISKGNDDLSKTINQAKILEGSVRNT
GIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDFLGLKTLTLIKDA
IRIVKERHGVELDPENFPIDDTETYELFQRGETVGIFQYESPGMQKYMRELKPTVFADLI
AMNALYRPGPLEYIPSFIKRKHGLEPIAYDLDDMEEYLQETYGITVYQEQVMLLSQKLAG
FTKGEADVLRKAMGKKLRDVLDKMKPKFVNQAAEKGHDKTKLEKIWKDWEAFASYAFNKS
HSTCYAWVAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIEVLGPDVNES
KDGFTVNKEGQIRFGLAAIKGAGGAAVHSVIEERAENGPYKDIFDFTQRINLRSVNKKTL
ESLAMAGGFDCFPDHHRRQYLEAAENDATLIEKAVKYAQKKAQEAESSQVSLFGGGAGME
VMMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEFDSFTNTPLSEFSNTDALKA
KGEIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNGGHTFFLFGEDYIKYKEYFMTGWFLYF
TGSVQGKRWNPDELEFKVGNMMLLNEVRGKMVKGLRVNINLDDLTIDLMERLEAITSKYK
GEAKLFINVTDVKEKIAVDLRSTKFLIDPSQDMINELENIPELAYKIL
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtacattatttttgataccgaaaccactggtttacccaggaactacaatgcccccatc
accgatctggacaactggccacggctcgtacagctggcttggcagctccatgatgagcgg
ggcaaactgatttccaaccaaaactatattgtcaagcctgaaggttttaccattccttat
aatgccgaaaaagtccatggcatctccacggaccgcgcattgaaagaaggccatgaccta
aagaaggtattggaaatcttccacaaggatgtagaaaaagccacctatctggtcggccac
aatatcggttttgacatcaatgtctgcggtgcggagtttttgagagtggacctgcccatg
caactactcgaaaagcaggaactggacaccaaggacatttccactgatttctgcgccatc
cccggaggcaaaggtggtaaatacaaatggccaacactgacagagctccatcaaaaactc
ttcggagtgggatttgaggatgcccacgatgccgcttatgacgtggacgcaacagccaag
tgcttctttggactgatcactgccgaggtacagcctcccgtagatggccttacggtggaa
gatgtcatctacgaaccaccaaaactcgacgctgccaactttgccgctgctaaggaccaa
cagaaggaagctgcccaagatgtcatcaagcaagcgagaaaagcagacatcaccaaccta
gtggacatccctttcagccacctccatgtccacacccaatactccatcctgcaggccacc
tcagaaatccctgcaatggtcgccagggccaaggaattcaatatgcccgccattgcgatg
acggatcacggcaatatgatggctgctttccattttgtaaaagaagccatgtcaaacgac
atcaagccagtagtgggctgtgaatttaacatctgccgggatcatcaaaacaagtcccaa
aaagacggaggcttccagacggtcttgcttgccaaaaacaaagcgggctatcacaactta
gccaaattggcttcatttgcctacacgcaaggcttttattatttgcctaggattgacaag
gaactattggtccaatacaaaggagacatcatcgctactaccggtggactttggggagaa
atcccgttccttatcctgaacgtcggcgaaacacaagccgaagaagcttttgtatggtgg
aaagagcagtttggagaggacttttacgtcgaactgaaccgtcacggaatccccgaagaa
gaaaaagtaaacgaagtcctattgcgctttgcccaaaaatacgatgtcaagtatttcgca
gccaatagtacctattacaacaccaaaaatgacgccaaggcccacgacatccttctctgc
gtaaaagatggggagaaagtcgataagccgaaaaggtacataggcaaaaaaggccgggaa
ttccgctacggtttccctaacgaggagttctatatcaagacacccgaagagatgaaaaag
ctcttcgccgatctccccgaagccatcgagtgcaccaatgaaatcatcgaaaaggtagag
gcctacaagctggaaagggatgttttacttcccaagttcaacattccagagcggttccaa
gacccacaagatgatgaagacggtggcaagcgtggggaaaatgccttcttgcgccacctc
acttatgaaggagccaagaggcgctatccagagatcacggaagaaatcagggaacggctg
gattttgaactttctattattgcaaacactggttaccctgggtacttcctgatcgtacag
gattttaccacagcagcacgtgaaatgggcgtatctgtggggccaggcaggggatctgcc
gccggctctgcggtagcctactgtatcggtattaccaatgtggatccaatcgcctacgat
ctcctttttgagagattccttaatccagacagggtttccctccccgatattgatattgac
tttgatgaccatggccgtcaaaaagtcatcgattatgtgatcgagaaatatggtgccaat
caggtggcccagatcatcacttatggtaccatggcagccaaatcggccatccgtgatacc
gcgagagctttggacctgcccttgtcggatgcggatcgccttgccaagctagtgccagac
atcaagctaaaagcactctttggactggccaatgaccgcgctaaactggccgacaagctt
aagaacaattcggagaacatcgacaaagcctacgagctgatcaatatctccaagggcaat
gacgacctgtccaaaaccatcaaccaagccaaaatcctggaaggctctgtaagaaacaca
gggatccacgcttgtggggtcatcatcacgccagatgatattaccaatttcgtcccagta
gcgctggcgaaagattcggacatgtactgcacgcagtttgacaactccgtggtggagaat
gccggcctgttgaaaatggacttcttagggctcaaaaccctcaccctgatcaaagatgcc
attcgcatcgtcaaggagcgtcacggtgtggaactggatccagaaaacttccccatagat
gacacggaaacgtatgagcttttccagcgtggcgaaacggtagggatattccagtatgaa
tcccccggcatgcagaaatacatgcgtgagctaaagccaacggtgtttgctgacttgata
gccatgaacgcactctatcgcccaggaccattggaatacatcccaagctttatcaaaaga
aagcacggcctggaacccatcgcctacgatctcgatgatatggaggaatatctccaagaa
acctacgggattacggtgtaccaggaacaggtgatgttgctctcccaaaagctggcagga
tttaccaagggtgaggccgatgtgctgcgtaaggccatgggtaaaaagctccgcgatgta
ctggacaaaatgaagcctaaatttgtcaaccaagccgctgaaaaaggccatgacaaaacc
aagctggaaaagatctggaaagactgggaagcctttgcctcctatgcctttaacaagtcc
cactccacctgctatgcttgggtagcctatcaaacagcctacctaaaagcccactacccc
gccgaatacatggcgtccgtactgagcaataacatgaatgacatcacccaagtcaccttc
ttcatggaagagtgtaaacgcatggggatagaagtactgggaccagatgtgaatgagtcc
aaagatggctttacggtaaataaggaaggccaaattcgatttggcttggcggcaatcaaa
ggagcgggtggtgcagccgttcactcggtcattgaagagcgggcagaaaatggcccttat
aaggacatatttgattttacccaacgtataaacttgcgctctgtcaataaaaaaacgttg
gaatcactggccatggccggaggctttgactgtttccctgaccaccataggcggcaatac
ttggaggctgccgaaaatgacgctaccctgatcgaaaaagcagtcaaatacgcccaaaag
aaggcccaggaagccgaaagctcccaggtttccctctttggaggtggtgctggaatggaa
gttatgatgcctagcatcactccgatagagccatttagccaactgcaacaattaaatatt
gaaaaagaagtcgttgggctttatatttctggccacccattggatcaatttaaggtagaa
tttgactcgttcaccaacacgcccttgtccgaattctccaatacggatgcactgaaagcc
aaaggtgaaattaaagctgccggagtagtcacgtcctttgcccatcgtaccaccaaaaac
ggcaacccttttggcacattgaccctagaggactataacggtggccatacgttctttcta
tttggtgaagactacatcaaatacaaagagtatttcatgactggatggttcttatacttc
acaggaagtgtgcagggcaaacgctggaatcccgacgaactggaatttaaagttggaaat
atgatgctgctcaatgaagtccgtggaaaaatggtcaaaggactaagggtaaacatcaac
ctggatgaccttacaatcgacctgatggagaggctggaagccattacttccaagtacaaa
ggtgaagccaagctctttatcaatgtaacagatgtcaaagagaagattgccgtggacctt
agatctactaaatttttgatcgatccatcacaagatatgatcaatgaattggagaacatc
cctgagctagcgtacaaaatcctctaa
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