Echinicola strongylocentroti: DN752_23795
Help
Entry
DN752_23795 CDS
T05506
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
est
Echinicola strongylocentroti
Brite
KEGG Orthology (KO) [BR:
est00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
est03032
]
DN752_23795 (topA)
03400 DNA repair and recombination proteins [BR:
est03400
]
DN752_23795 (topA)
Enzymes [BR:
est01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DN752_23795 (topA)
DNA replication proteins [BR:
est03032
]
Prokaryotic type
DNA Topoisomerases
DN752_23795 (topA)
DNA repair and recombination proteins [BR:
est03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DN752_23795 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
O-FucT
EF_EFCAB10_C
Motif
Other DBs
NCBI-ProteinID:
AWW32906
UniProt:
A0A2Z4IQR6
LinkDB
All DBs
Position
complement(6103795..6106116)
Genome browser
AA seq
773 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEGYLGKDYKVTSSYGHVRDLPKGDKAIDIKNHFKPTYEVTSDK
KEVIKQLKKMVKESETIYLASDDDREGEAISWHLKEVLKLDNEKTKRIVFREITKNAIIK
AIENPRSIDIDLVNAQQARRILDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRFIVERER
EIDKFESKSSYKVTAIFDVNGKVLNAELPRKFETQEEAEEFLKACLSAEFSIKNLEKKPT
KKTPAAPFTTSTLQQEASRKLGFSVAQTMTLAQRLYEAGKITYMRTDSVNLSQDAMESAQ
NQIMSAFGPEYHKSRKYTSKSEGAQEAHEAIRPTNFANEETSGERNEQRLYELIWKRAIA
SQMADAQLEKTLVTIGISNSDLTLSASGEVIKFEGFLKVYLESTDDEEEEETNGNRGLLP
PLTIGQDLDLIEMKSRQSFTRPPARYTEASLVKKLEEMGIGRPSTYAPTISTIQKRNYVI
KESRDGKPRNYTEMVIKDGEFSKAEKTENYGSDKNKLFPTNIAMVVNDFLVEHFPNVIDY
KFTAKVEKEFDDIAHGAQQWDNMIENFYSKFHNTVEEAETVERANVSSSRELGKDPKTGK
PIIARLGKFGPLVQIGEQDDEEKQFASLRKGQFIENITLEDALELFKLPRDVGMFEDKKI
VAAIGRFGPYVRHDGKFVSLGKEYDPLSITEEEAILLIKDKREADAKKHIKTFEENPEIQ
ILNGRWGPYIKFAKNNFKIPKDKVAEDLSYEETIEIIENQPEKKKGRYAKKKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatctagtcattgtcgaatctccggccaaggccaaaaccatcgaaggctac
ctaggaaaagattataaagtaacatccagctacggacatgtgcgtgaccttccaaaagga
gacaaggctattgatataaaaaaccactttaaaccaacctatgaagtaacttccgataaa
aaagaagtcatcaagcaactcaagaaaatggtgaaggaatccgaaaccatctacttggca
agtgatgatgaccgtgaaggagaggctatttcatggcacttaaaggaggtgttaaaactg
gacaatgagaagaccaaacgaattgtctttcgggaaatcactaaaaatgccatcatcaaa
gcaatcgaaaacccgaggagcatagatattgatctcgtcaatgcgcaacaggccaggaga
atactggacaggttagtaggatttgagctttcgcccgtcctttggaagaaggtaaaagcg
ggcctctcggcaggcagggtccaatcggtagccgtgaggtttatcgtggagcgggagcgt
gaaattgataagtttgaatctaagtcatcctataaggtgacggctatttttgatgtcaat
ggcaaggtgctcaatgccgaattgcccagaaaattcgaaacccaagaggaagcagaagaa
tttctgaaagcttgcctcagtgcagaattttccattaaaaacttagagaaaaaacctacc
aaaaagactccagcggcaccctttacgacttccacccttcagcaggaagcgagtaggaag
ctgggtttttctgtagcccagaccatgaccttggcccagcgactgtatgaggcgggtaag
atcacgtacatgagaacggacagtgtgaacttgtcccaagatgctatggaaagtgcccaa
aaccagatcatgtctgcttttggaccggaatatcataaatcgcgaaaatacacttcaaag
tcagaaggtgcccaagaagctcacgaagctatccggccgaccaattttgccaacgaagaa
acctctggagagagaaatgagcagcgcctctatgaactgatctggaaacgggctatcgct
tcacagatggctgatgcgcagttggaaaaaaccttggtaactatcggcatcagtaattct
gaccttaccctcagtgccagtggtgaggtgattaaatttgaagggttcttaaaggtatat
cttgaaagtaccgatgatgaagaagaggaagaaaccaatggaaacagaggacttttgccg
ccattgaccatcggtcaagaccttgatcttatcgagatgaaatcccgccagagctttaca
agacctccggcacgctacacagaagcgtccttggtaaagaaacttgaggaaatgggcatc
ggccgtccttctacttatgccccgaccatatccactatccaaaagcggaattacgtcatc
aaggaatcaagagatggcaaacccaggaactacacggagatggtgatcaaggacggagaa
tttagcaaagccgaaaaaactgaaaactacggctccgataaaaacaagctattccctacc
aatatcgccatggtagtcaacgacttcttagtggagcattttcctaatgtaattgactat
aaatttacagccaaggtagagaaggaatttgatgatatagcgcatggtgcccagcaatgg
gacaatatgatcgaaaacttctatagcaaattccataacacggtcgaagaagccgaaacc
gtagaacgcgccaatgtaagttcatccagggaactcggaaaggaccccaaaaccggcaag
ccgatcattgccagattgggtaaatttggtcctcttgtgcagattggcgaacaagatgat
gaggaaaagcaatttgcaagtctcaggaaagggcaattcattgaaaatatcaccctagaa
gatgccttggaactgttcaaattgcctagggacgttgggatgtttgaagacaaaaagatt
gtagcggccattggtcgttttgggccttatgtacgccatgacggtaaatttgtatcttta
ggcaaagaatatgatccgctaagtatcaccgaagaagaggctatcctgctcatcaaggac
aagcgggaagccgatgccaagaagcacatcaagacatttgaggaaaacccagagattcaa
atcctcaatggacggtggggaccatatatcaaatttgccaagaataattttaagatcccc
aaggataaggtagcggaagatctcagctatgaagaaactattgaaatcatagaaaaccag
cctgaaaagaaaaaaggcaggtacgctaaaaagaaaaagtaa
DBGET
integrated database retrieval system
