Echinicola strongylocentroti: DN752_24215
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Entry
DN752_24215 CDS
T05506
Name
(GenBank) ATP-dependent helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
est
Echinicola strongylocentroti
Pathway
est03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
est00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN752_24215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
est03019
]
DN752_24215
Enzymes [BR:
est01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DN752_24215
Messenger RNA biogenesis [BR:
est03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN752_24215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Helicase_RecD
AAA_19
UvrD-helicase
CMS1
Flavi_DEAD
T_Ag_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AWW32976
UniProt:
A0A2Z4IQZ2
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All DBs
Position
6231030..6232403
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AA seq
457 aa
AA seq
DB search
MTSDNFEIFNFNESLQEGLDAMGFTKPTPIQKEAIPEILKGNDLIACAQTGTGKTAAFIL
PILHKIAEKGDNQFNTMIIAPTRELAIQIDQQIQGLAYFVGVSSIAIYGGGDGLAWEQQK
KALEHGTEIVVATPGRLIALLAGGKIKLDTLEHLVLDEADRMLDMGFSDDILKIINYLPK
SRQTVLFSATMPPKIRQFSKQIVSDPSEINIAISKTAKGVTQLVYMVHDPDKEKLLEQIL
TQKNYEAVIIFASTKDKVKSIFRTLKKKFDTEAFHSDLTQEERENIMSNFKNRSLKILIG
TDIISRGIDVEGIELVINYDTPNDPEDYVHRVGRTARADKKGEAITFVNDKDLYKLHRIQ
NLIGLEISRMDLPDGINNAPTYKEGKPGKKKGPSGGGSFKKRDNKKKPNHSGRSNNKGEK
PQNTTEKPQQSSNPDSSSKTKDAENAGKFKTRRNVTE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagataatttcgaaatttttaatttcaacgaatcactccaggaaggattggat
gctatgggatttaccaagccaacacctatccaaaaagaagctattcccgaaatcctcaaa
ggcaatgatctgattgcctgcgctcagacaggaaccggaaaaactgcggcctttattctt
cctattcttcacaagattgccgaaaaaggagacaaccaattcaatacaatgatcatagcc
ccgacgagggagcttgctattcagatcgaccagcagatccaaggacttgcctactttgta
ggggtaagttcaatcgccatttatggcggaggcgacgggctggcctgggagcagcagaag
aaggccttggaacacggcacggaaatcgttgtggccacaccaggcagacttattgccttg
ttggcaggagggaagatcaagttggatactttagagcatttggtactggatgaggccgat
agaatgcttgacatgggcttctcggatgatatcctgaaaatcatcaactacttacccaaa
agccgccagacagttcttttttctgccactatgcctcctaaaatccggcaattcagcaag
cagattgtttcggatccttccgaaatcaacatcgccatcagtaaaacagccaaaggggtc
acccagctggtctacatggtccatgatccagataaagagaaactgttggagcaaatcctt
acacaaaaaaactatgaggcagttataatctttgcctctacaaaggataaagtcaaaagt
attttcaggaccctaaagaagaaattcgatacggaagctttccactcggacctcacacaa
gaagagcgtgaaaatatcatgtccaattttaaaaataggtcccttaaaatattaattggt
accgatatcatttccagaggtatcgatgtagaaggaatcgaattggttatcaactacgat
acaccaaatgatccggaggattatgtacaccgcgtgggaaggactgccagagccgataaa
aaaggagaggccatcacttttgtaaatgataaagacctttataaactccatagaatccaa
aatcttataggactggaaatctccagaatggacttgcctgatgggataaacaacgcacct
acctacaaagagggtaaaccgggaaaaaagaaaggaccatctggaggaggtagtttcaaa
aagagagacaataagaagaaacctaaccattcaggtagaagtaataataaaggtgaaaag
ccccaaaatacgacagagaaacctcaacaatcatcaaaccctgatagttcttcaaagacc
aaagatgctgaaaacgcaggaaaatttaaaacaagacgaaatgtaactgaatag
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