Empedobacter stercoris: HNV03_00505
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Entry
HNV03_00505 CDS
T06804
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
este
Empedobacter stercoris
Pathway
este03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HNV03_00505 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
este03011
]
HNV03_00505 (rpsC)
Ribosome [BR:
este03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HNV03_00505 (rpsC)
Bacteria
HNV03_00505 (rpsC)
Archaea
HNV03_00505 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
Ig_Shg
Motif
Other DBs
NCBI-ProteinID:
QNT13280
LinkDB
All DBs
Position
96279..97001
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AA seq
240 aa
AA seq
DB search
MGQKTNPIGNRLGIIRGWDSNWYGGNDYGDKIAEDAKIRTYLRARLSKAGVSRIYIDRTL
KLVTVTVTTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDAILVGDSIA
RQIENRISYRRAIKMAIQSAMRMNAEGIKVQISGRLNGAEMARSETYKDGRIPLSTFRAD
IDYHISEAHTTYGRLGIKVWIMKGEVYGKRELSPLVGLQKKQKKSDNNRKGGERSNNRKR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaaactaatccaatcggaaatcgtttaggaatcatcagaggatgggattct
aactggtacggtggaaatgattacggtgataaaattgcagaagatgcaaaaattcgtact
tatttaagagcgcgtttatctaaagccggtgtttctcgtatttatatcgatcgtacttta
aaattagttacagttacagtaactactgctcgtccaggtatcatcattggtaaaggtgga
caagaagttgacaaattaaaagaagagttaaagaaaatcactggtaaagaggttcaaatt
aacatcttcgaaattaagagaccagaattagatgcaatcttagtaggtgatagtatcgct
cgtcaaattgagaatcgtatttcttaccgtcgtgcaatcaaaatggctattcaatctgca
atgagaatgaacgctgaaggaattaaagttcaaatctctggtcgtttaaacggtgcagag
atggcacgttctgaaacttataaagacggacgtattcctttgtctacattccgtgcagac
attgattaccacatttcagaagctcatacaacttacggtcgtttagggatcaaagtatgg
atcatgaaaggtgaagtatatggtaagagagaattatctccattagttggtttacagaaa
aaacaaaaaaaatctgataacaacagaaaaggaggtgagagatctaataatagaaagcga
taa
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