Empedobacter stercoris: HNV03_01880
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Entry
HNV03_01880 CDS
T06804
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
este
Empedobacter stercoris
Pathway
este03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNV03_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_01880
Enzymes [BR:
este01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
HNV03_01880
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNV03_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNT13524
LinkDB
All DBs
Position
376557..377057
Genome browser
AA seq
166 aa
AA seq
DB search
MEILKDLLKENLDIVFCGTAVGNKSAKVNAYYAGNGNQFYSALKTIGLTNELVEPQNYKT
LLDYKIGLTDLIKTDFGNDNEIDQSTYDVKGFLEKINLYKPKLVVFNGKEAGRVFLNKTK
TSQVNFGLIEDLELNQTKFFIAPSTSGSARGYWDISIWEDILNHIK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggagattttaaaagatttactaaaagagaatttagatatagttttttgtggaactgct
gtaggaaataaatctgccaaagtaaatgcatattatgctggaaatgggaatcaattttac
agtgctttaaaaacgattgggttaaccaatgaacttgtagaacctcaaaattataagact
ttacttgattataaaattggactaacagatttaattaaaactgattttgggaatgataat
gaaattgatcaatcaacttacgatgtaaaaggatttcttgagaaaattaatttatataaa
ccaaaattagtagtttttaatggaaaagaggcagggagagtttttttaaataaaactaaa
acatctcaagttaatttcggtttgattgaagatttagaattaaatcaaacaaaatttttt
atagctccttcaacttcgggttcagcaagaggatattgggatatatcaatttgggaagat
attttaaatcacataaaatga
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