Empedobacter stercoris: HNV03_03255
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Entry
HNV03_03255 CDS
T06804
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_03255
Enzymes [BR:
este01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HNV03_03255
DNA repair and recombination proteins [BR:
este03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HNV03_03255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QNT13755
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All DBs
Position
complement(664545..667232)
Genome browser
AA seq
895 aa
AA seq
DB search
MAQFIENVVKDLLHNQTNFINTTLVLPGKRPMLFFREEFQRQSQNIILPQMKSIEELMSE
LSGLEIISGINLWFKAYQAYKKIVDKPDSFEDFIKWGPTVLKDFDDIDASLQPANKVLDY
LVSVERINQWGEGKIDIGKNEIIQNHLTFWGIVSKLYVQLQQDLLDSKEGYAGMVFRIAS
EKVNEIVENKTSHYVFAGFNALTKAEQALIFKLEKENLATLYFDADKYYYENPNQEAGSF
LRKYKEKIKPINWVVDEFSKPKNLHTIGVAKQVGQAKYIADLIRNLNDDEIKNTALILAD
ESILPAILNSLPENITHLNISMGIPLRSVPLAQFFKSIFELQMNREKLGKGSMFYFKNVL
QILENKTLSHFSSDKSRQLIDEIRTQNRIFNSEKSIQNALENSIFKSIFHIPTSITAFIH
HLKNWTDELLHHPSMNDLLTKEYLFFFKKVFNQLHENLLQVNDIKDYRTLFLLYNKIVSS
ESISFIGEPLKGLQLMGLLETRLLNFDNIIMTSVNDEILPLGRQNNTFIPYDIRKQMKLN
TFTENDSIYAYHFYRLIQRAKNAYFVYDTEADGMGSGEKSRFLAQIKFESHHKMKEIFAA
PSFVTKPLKEIIVPKTDETMKKLWNWAEYGISPSSLSSYLRNPLDFYEQRIFNVKEVEEA
EETVSARTLGNIVHGALEDLYQPYLNRILHENDFKLIEKEKDKTLQVHFQKEYKDGHLDK
GPNYLIYKIAERIVDGVLSKDVKTVKENEFIIQSLESKHEVDFTLTNGKVVKLKGVIDRI
DSVNNQLRIIDYKTGYAKDISVKTEEIEVIYQKEDKAKQLQLIFYAHLYYSNKENINKEI
ELCIYPIKFPNKELIKLSVDRNSTINYSIVKHSTEPMSKLIEEILNQEIPFKQPE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattcatagaaaatgttgtaaaagatttattgcataatcaaacaaattttatc
aatacgactttggtcttaccaggaaagcgtcctatgcttttttttagagaagaatttcaa
cgtcaatcgcaaaatatcattctccctcaaatgaaaagtatcgaggaattgatgagcgaa
ctttctggtttagaaattatttctggtatcaatctttggttcaaagcctatcaagcttat
aaaaaaatcgttgacaaaccagattctttcgaagattttattaaatggggaccaactgtt
ttaaaagactttgatgatattgacgcttccttgcaacctgcgaataaagtgttagattat
ttggtttcggttgaacgaatcaatcaatggggtgaaggaaaaattgatattggtaaaaat
gaaatcattcaaaatcatttaactttttggggaatcgtttcaaagttatacgttcaattg
caacaagatttacttgattcgaaggaaggttatgctggaatggtttttagaattgcaagc
gaaaaagtcaacgaaattgttgagaacaaaacttctcattatgtatttgctggtttcaat
gcattaacgaaagcagaacaagcgcttatttttaaattagaaaaagaaaatttagccact
ttatattttgatgcagataaatattactatgaaaaccccaatcaggaggcgggttcattt
ttaagaaaatacaaagaaaaaataaaaccaattaattgggttgttgatgaattttcgaag
ccaaaaaatttacacacaattggtgttgcaaaacaagttggacaagcaaaatacatcgca
gatttaatccgaaacctgaacgacgatgagattaaaaatacagctttaattttggctgat
gaatctattttacctgcaattctaaattcattacccgaaaatattacgcatcttaatatc
tcgatgggaattccattgcgttcggttccattagcacaatttttcaaatcgattttcgaa
ttgcagatgaatcgcgaaaaattaggaaaaggatcgatgttttatttcaagaatgtttta
caaattctcgaaaacaaaaccttatctcattttagttcggataaaagtcgacaactaatt
gatgaaattcgtactcaaaatcgaatattcaattcagaaaaatcaattcaaaatgcgtta
gaaaattctattttcaaatccatttttcatattccaacatctattacagcgtttattcat
catttaaaaaattggacagatgaattattgcatcatccttcgatgaatgatttgttaacg
aaagaatacttgttctttttcaaaaaagtattcaatcaattacacgaaaacttactacaa
gtaaatgatataaaagattatagaacattatttttgttgtacaacaaaatcgtttcttcc
gaatctatttcgtttattggcgaaccattgaaaggtttacaattaatgggacttttggaa
acacgtttattaaattttgacaacattatcatgacttctgtgaatgatgaaattttgcct
ttgggacgacaaaacaatacatttattccgtatgacattcgcaaacaaatgaaattgaat
acatttaccgaaaacgattcgatttatgcgtatcacttttaccgattgattcaacgtgcg
aaaaatgcttactttgtttatgatacagaagcagacggaatgggttctggcgaaaaatct
cgctttttagcgcaaataaaatttgaaagtcatcacaagatgaaagaaatttttgctgca
ccaagttttgttacaaaaccattgaaagaaattattgttcctaaaacagatgaaacgatg
aaaaaactttggaattgggcagaatacggaatctctccttcttctctttcttcctatttg
cgtaatccattggatttttatgaacaacgaatcttcaacgtaaaagaagttgaagaggcc
gaagaaaccgtaagtgcaagaactttagggaatattgtacatggtgctttagaagattta
tatcaaccttatttgaaccgaattttacacgaaaacgatttcaaattaattgaaaaagaa
aaagataagactttacaagttcattttcagaaggaatataaagatggacatttagacaaa
ggtccaaactatttgatttataaaattgcagaacgaattgttgacggcgttttgtcaaaa
gatgtgaaaacggtaaaagaaaatgaatttatcattcaatcattggaatcaaaacacgaa
gtagattttaccttgaccaatggaaaagtagtaaaacttaaaggtgttattgatcgtatt
gattctgttaacaatcaattgcgaattattgattacaaaacaggttatgcgaaagatatt
tcggttaaaacagaagaaatcgaagttatttatcaaaaagaagataaagcgaaacaattg
caattaatattttacgcgcatttgtattattccaacaaagaaaatataaataaagaaatt
gagttatgtatttatccaattaaatttcctaataaagaattaattaaactttctgtcgat
agaaattcaactataaattattcgatagtgaaacactcaacagaaccaatgtcaaaatta
attgaagaaattctaaatcaagaaattccattcaaacaaccagaatag
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