Empedobacter stercoris: HNV03_04380
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Entry
HNV03_04380 CDS
T06804
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
este03016
]
HNV03_04380 (mnmE)
Transfer RNA biogenesis [BR:
este03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HNV03_04380 (mnmE)
Prokaryotic type
Methyltransferases
HNV03_04380 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Ras
RsgA_GTPase
GTP_EFTU
Arf
ABC_tran
MMR_HSR1_Xtn
Roc
Guanylate_kin
DO-GTPase2
AAA_28
ABC_ATPase
AAA_29
GCV_T
FtsK_SpoIIIE
AAA_24
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QNT13953
LinkDB
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Position
complement(904172..905569)
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AA seq
465 aa
AA seq
DB search
MLNNDTICALATANGMGAIAVIRISGPEAISKVAQIYQSKFNATKSLNEASSHTIHLGYV
MDGDTIVDEALFSIFKNPHSYTGEDVVEISTHGSIYIQQKVLELLNKIGIRNANPGEYTF
RAFWNGKMDLTQAEAVADLIASDSKASHEIAIKQMRGGFSNQIKDLREQMINFAALMELE
LDFSEEDVEFADRSQFYNLLNQLQSILKRLADSFAFGNVIKNGVPVAIVGAPNAGKSTLL
NALLNEERAIVSDIEGTTRDTIEETIYIDGVGFRFIDTAGIREAGDSIERIGIEKTFEKI
DNATIIIYLYDANITADNQIANQLDDLQRRGKILFNVANKIDVNNNESSISDAIKQEFKD
VVHLEISAKDHYNIEALKENLIHQIKLKGSNQDDTIVTNSRHLEALQNTLSQIGKIKQGM
DMGLPGDLLAMDIREALTYLGHITGEIDVDQDILGTIFGKFCIGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacaacgatacaatttgtgcattggcaacagccaatggaatgggcgctatagcg
gttattcgtatttctggaccagaagcaatttctaaagttgctcagatttatcaatcaaaa
tttaatgctactaaatctttgaatgaagcttcttctcatactatacatttgggttatgtg
atggacggcgataccattgttgatgaagcgctattttctattttcaaaaatccgcattct
tatacaggtgaagatgttgtcgaaatttcgacacatggctcaatttatatccaacaaaaa
gtattagaactattaaataaaattggcattcgtaatgccaatccaggagaatatacattc
cgcgctttttggaacggcaaaatggatttaacacaagcagaagctgtggccgatttgatt
gcttcagactcgaaagcatcacacgaaattgccatcaaacaaatgcgtggtggtttctcg
aatcaaatcaaagatttgagagaacagatgatcaactttgctgctttgatggaattggag
ttggatttttctgaagaagacgtcgaatttgcagatcgatcgcaattttataatttatta
aaccaattacaatcgattcttaaacgtttagctgattcttttgcatttggaaatgtgatt
aaaaatggagttcctgttgctattgtcggagcacccaatgcaggtaaatctactttgttg
aatgctttattaaacgaagaacgtgccattgtttcggacattgaaggaacaacacgagat
acaatcgaggaaactatttatattgacggtgttggatttcgtttcattgataccgcaggg
attcgtgaagctggtgacagtatcgaacgtattggaatagaaaaaacatttgaaaaaatt
gacaatgcaacaattatcatttatttgtatgacgcgaatattacagcagataaccaaatt
gccaatcaattagatgatttgcaacgacgtggtaaaatcttgtttaatgtagcgaataaa
atagatgtaaacaataacgaatcatccatttctgatgctatcaaacaggagtttaaagat
gttgtacatttagaaatttcggcaaaagaccactacaatatcgaggctttaaaagaaaat
ttgatccatcaaatcaaattaaaaggaagcaatcaagatgacacgattgtaaccaattcg
cgtcacttagaagcactgcaaaatacgctttcacaaatcggaaaaataaaacaaggtatg
gacatgggacttcctggcgatttattagccatggatattcgtgaagctttaacttattta
ggtcatattacaggagaaatagatgttgaccaagatattcttgggacgatatttggcaag
ttttgtattgggaaataa
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