Empedobacter stercoris: HNV03_04410
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Entry
HNV03_04410 CDS
T06804
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
este
Empedobacter stercoris
Pathway
este02024
Quorum sensing
este03060
Protein export
este03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HNV03_04410 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HNV03_04410 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HNV03_04410 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
este02044
]
HNV03_04410 (secD)
Secretion system [BR:
este02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HNV03_04410 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
QNT13959
LinkDB
All DBs
Position
910259..913174
Genome browser
AA seq
971 aa
AA seq
DB search
MRGRWLIAAFAIILSLLCIRQLSYTWYTTKVENEAARLASKPEDEPRILDSLAQHPLDLG
IIKYDYEYAKNNEINLGLDLKGGINVILQVSERDLLLNLSAKSQNPMLAAALDATDKAQK
TNGNVPYVELFFQEFDKIKGGTKYAAADLFGNKNNADKIAYNASDDQVKEVIRKDIEAKV
ATAYDVIKSRIDQFGVVEPVVQRLGDKGDGRILVELPGVSDTDRVKKLLQSTAKLEFWQV
VRQDPTVLQYFSGVNTEKYNVKNDKGQTIKSLAEVMQPTGSNASFVVNVKDTAVVNRVLQ
DKSFVPGLPANIRGYKYSWANKPMNLGNQANDKSAPKLLEFYVLKGKNGSQEPLIEGDKV
VSASADRNPGSITNEPVVSMQMNPVGAQEWARITDELKPSSIDRDGQGVAIVLDNMVYSA
PNIKNQITGGNSQISGNFTLEEAKDLANILQAGSLPASSKIVSAEVVGPSLGQEAINSSL
IAFGCAFTLVLIWMLFYYSRAGIYANIALIVNLLFLLGFLVSLKATLSLPGIAGIILTLV
TGMDANILIYERVKEELRKGKSLRQAVDFAYSWKGAFSAIIDANSTSFITALILFFFGKG
PVVGFATTFMIGIFTSTFTAIFITRYFVEGRLAKGKSVPFYTSFTAHWLQNIKVDLLKTR
KISYAISAVLTTVALISIFTKGFDMGIEFQGGRTYTVRFDKHVDPQQISESLGDVFVLDG
EKMQPQVKTYGGQNQVKITTAYKADEDGTNVDDEIKDKLYTGLKSYLPANMSEKDFSEDN
ATIGLMSSAKVGPTIADDTTRASFIAVSLALVAIFFYLIIMFKRWQFSLSTIIALTHDVI
IVLGVFSLFKGVLPFNMEIDQAFIAAILTVIGYSMNDSIIILDRIRENLTVEKNHKLYNI
INISTSETLSRTINTSLSTFLIVLIIFAFGGESIKGFMFAKLIGIVIGTFSSIFVASPLL
YDFTKKGQMNK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggaagatggctcattgcagcatttgcaatcattttaagtctcttgtgtatcaga
caactaagttatacttggtacaccactaaagtagagaatgaggctgcgcgtttggcgagt
aagccagaagacgaaccaagaattttagatagcttggctcagcatcctcttgatttagga
attatcaagtacgattacgagtatgccaaaaacaatgaaatcaatttaggattagatttg
aaaggtggtattaacgtaattttacaagtttctgaaagagatttattactaaatttatca
gcgaaaagtcaaaatccaatgttggcagcagctttggacgctactgataaagcccaaaaa
acaaacggtaacgtaccttatgtagaattattttttcaagagtttgataaaataaaagga
ggaacaaaatatgcagctgcggatttgtttggtaacaaaaacaatgcagataaaattgct
tataacgcttctgacgatcaggtaaaagaggtgattcgtaaagatatcgaagctaaagtt
gccactgcatatgatgtaataaagtctcgtatcgaccaatttggagttgtagaaccagtt
gttcaacgattaggagataaaggtgatggacgtatcttggtagaattaccaggtgtttct
gatactgaccgtgtaaaaaaattattacaatctacagcaaaattagagttttggcaggtt
gttcgtcaagatccaacagttttgcaatatttttctggtgtaaatacagaaaagtacaat
gtaaaaaatgacaaaggacaaacgattaaatcgttagctgaagttatgcaaccaacaggt
tctaatgcgagttttgttgtaaatgttaaagataccgctgttgttaatcgtgtgttacaa
gacaaaagttttgtgcctggtttaccagcaaacatcagaggatataaatattcttgggcg
aataagccaatgaatttaggaaatcaagctaatgataaatcagcgcctaaattattagaa
ttttatgttttaaaagggaaaaatggttctcaagagccattaattgaaggtgataaagta
gtttcagcttctgcagatcgtaacccaggctctattacaaatgaaccagtagtttcgatg
caaatgaatccagtaggcgcacaagaatgggcacgtattacggacgaattaaaaccttct
tcaattgatcgtgacggtcaaggtgttgcaattgtgttagataatatggtgtattctgca
ccgaatattaaaaaccaaattacaggaggtaactctcaaatttcgggtaactttacgtta
gaagaagcaaaagatttagcaaatattttacaagcaggttctttaccagcttcatctaaa
attgtttcagcggaggttgtaggaccttcattaggacaagaagcaattaacagttctttg
attgcatttggttgtgcgtttacattggtattaatctggatgttgttctactacagccgt
gcaggtatctatgcgaacatagcattaatcgttaatttattattcttattaggattctta
gtttcattaaaagctactttatctttaccaggtatcgccgggattatcttgacgttggta
acaggaatggacgcgaatatcttaatttacgaacgtgtaaaagaagaattaagaaaagga
aaatcattacgacaagcagtagattttgcttactcttggaaaggtgctttctctgcaatt
attgatgcgaattcaacatcatttatcacagctttaattttattcttctttggtaaaggt
ccagttgtaggtttcgcaacaacgtttatgattggtatttttacttctacatttacagcg
atttttattacacgttattttgtagaaggtcgtttagcaaaaggaaaatcagttcctttc
tatacatcttttacagcgcattggttacaaaatatcaaagttgacttattaaaaacaaga
aagatttcgtatgcgatttcagctgttttaactactgtagcattgatttctattttcaca
aaaggatttgatatgggtatcgagtttcaaggtggacgtacatatacagttcgttttgat
aaacatgtagatcctcagcaaatttctgaaagtttaggtgatgtctttgttttggacgga
gaaaaaatgcaacctcaagtaaaaacatatggtggtcaaaaccaagtaaagattacaact
gcttacaaagcagatgaggatggaactaatgtagatgacgaaataaaagataaattatat
acagggcttaaatcttatttaccagcaaatatgtctgagaaagatttctcagaagataat
gcgacaataggtttaatgtcttctgcaaaagtaggtcctacaattgctgatgatacgaca
agagcttcatttattgcagtttctttagcattagtagcaattttcttctacttaatcatc
atgttcaaacgttggcaattctcattatcaactatcattgctttgacgcatgacgtaatt
attgtattaggtgttttctctttatttaaaggtgttttaccattcaatatggagattgac
caagcctttattgctgcgattttgacagtaattggttattcgatgaatgactcgattatt
atcttggatcgtattcgtgaaaacttaacagttgagaaaaaccataaattgtataatatt
attaatatttctacatcagaaacattatctcgtacaatcaatacgtctttatcaacgttc
ttaatcgtattaatcatctttgcatttggtggagaatcaatcaaaggatttatgtttgcg
aaattgattggtattgtaattggtactttctcatctattttcgttgcatctcctttattg
tacgactttacgaaaaaaggtcaaatgaataaataa
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