Empedobacter stercoris: HNV03_04520
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Entry
HNV03_04520 CDS
T06804
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
este
Empedobacter stercoris
Brite
KEGG Orthology (KO) [BR:
este00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
este03009
]
HNV03_04520 (rimO)
Enzymes [BR:
este01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HNV03_04520 (rimO)
Ribosome biogenesis [BR:
este03009
]
Prokaryotic type
ribosomal protein modification factors
HNV03_04520 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF6718
Motif
Other DBs
NCBI-ProteinID:
QNT13977
LinkDB
All DBs
Position
935191..936495
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AA seq
434 aa
AA seq
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MRTKSTGKKKINVITLGCSKNVYDSEVLMGQLKANGKEVVHEQSGEIVVINTCGFIDNAK
EESIDTILDYVQRKEDGLVEKVFVTGCLSERYKPDLLEQIPDVDQYFGTRELPLLLKALG
ADYKHELVGERLTTTPRHYAYLKIAEGCDRPCSFCAIPLMRGGNVSRPIEDLVTEATKLA
KNGTKELILIAQDLTYYGLDIYKKRELASLLKELVKVEGIEWIRLHYAFPAGFPEDVLDV
IREEPKVCNYLDIPLQHISTNILKSMRRGTTKEKTNALLEAFRSKVPGMTIRTTLICGYP
GETEEDFQEMKEWVQAQKFDRLGCFTYSHEENTHAYNLVDDVPEEVKQQRVEEIMEIQSQ
ISYDLNQEKIGQTFRVLIDRKEGDNFIGRSEHDSPDVDNEILISAVDTYLPIGDFVNVEI
IEAYEFDLIGKVID
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacgaaatcgactgggaaaaagaaaataaatgtaattacgttagggtgttctaaa
aacgtatatgattctgaagtattaatggggcaattgaaagcaaatggaaaagaagtagtt
catgagcagtcaggagaaattgttgtgattaatacatgtggttttattgataatgcgaaa
gaagaaagtatcgataccattttagactatgtacaacgtaaagaagacggtttagtagaa
aaagtttttgtgacaggatgcttatctgagcgttataaaccagatttattagagcaaata
ccagatgttgatcaatattttggaacacgtgagttaccattgttattaaaagctttaggt
gcagattataaacacgaattagtaggggagcgtttaacgactacacctcgccattatgcg
tatttaaaaattgccgaaggttgcgatcgtccatgttcattttgtgcaattcctttgatg
cgtggaggaaacgtttctcgtccaatcgaagatttagttacggaggcaactaaattagcg
aaaaatggaacaaaagaattgattttaatcgcacaagatttaacctactacggattagat
atctataaaaaacgcgaattagcaagtcttttaaaagaattggtaaaagtagaagggatc
gagtggattcgtttacattatgcttttccagctggattcccagaagatgttttagatgta
attcgtgaagaacctaaagtatgtaattatttagatattcctttgcaacacatatcgaca
aacattttgaaatcgatgcgtcgtggaacaacaaaagaaaaaacgaatgctttattagaa
gctttccgttctaaagttccaggaatgaccattcgtacgacgttaatttgtggttatcca
ggagaaacggaagaagatttccaagaaatgaaagagtgggttcaagctcaaaagttcgat
cgtttaggatgttttacttattctcatgaagaaaatacacatgcctataatttagtggac
gatgtaccagaggaagtaaaacaacaacgtgtggaagaaattatggagattcaatctcaa
atttcttacgatttgaaccaagaaaaaatcggtcaaacatttagagtgttgatagatcga
aaagaaggtgataattttattggtcgttctgaacatgattcgccagatgttgacaacgaa
attttaatttctgcagtagatacttatttaccaattggtgattttgttaatgtagaaatt
atcgaagcgtatgaattcgatttaataggtaaagtaattgattaa
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