Empedobacter stercoris: HNV03_06640
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Entry
HNV03_06640 CDS
T06804
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
este
Empedobacter stercoris
Pathway
este03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HNV03_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
este03400
]
HNV03_06640
Enzymes [BR:
este01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HNV03_06640
DNA repair and recombination proteins [BR:
este03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HNV03_06640
Prokaryotic type
HNV03_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNT14364
LinkDB
All DBs
Position
complement(1386418..1387089)
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AA seq
223 aa
AA seq
DB search
MDVKIDATWKEVLKDEFEKDYFIKLIDFVRDEYQTKTIYPPASKIFSAFDNTSFDNVKVV
LIGQDPYHGEGQANGLSFSVADGIKLPPSLRNIYKELKNDLDIEIATSGNLEPWAKQGVL
LLNATLTVEASNPGSHQKKGWEKFTDAVIQQLSDKKDNVVFILWGAYAQKKGAKIDRFKH
FVIESAHPSPLGAYRGFWGSKPFSKTNSFLEAKNIQPIDWKIK
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagattgatgcgacttggaaagaagtattgaaggatgaatttgagaaagat
tattttataaaattgattgattttgttagagatgaataccaaacaaaaacaatttaccct
cccgcatccaaaatattttctgcttttgataatacatcatttgacaatgttaaagtcgtt
ttaattgggcaagatccctatcatggggaaggacaggcgaatggattgtctttttctgtt
gcagatggaattaaattacctccaagcttacgcaatatttacaaagaattaaagaatgat
ttggacattgaaattgctacttcaggtaatttagaaccttgggcaaaacaaggtgttctt
ttattgaatgcaacattaaccgttgaagcatcaaatcctggatcacatcaaaagaaaggt
tgggaaaagtttacagatgctgtgatacaacagctttcagataaaaaagacaacgtagtg
tttatattatggggagcctatgcacaaaaaaaaggtgcaaaaatagatcgttttaaacat
tttgtgatcgaatctgcacatccgtctccattaggagcttacagagggttttggggaagt
aaacctttttctaaaaccaattcatttttagaagctaaaaatattcagccaattgattgg
aaaataaaatag
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integrated database retrieval system
