Empedobacter stercoris: HNV03_07270
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Entry
HNV03_07270 CDS
T06804
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
este
Empedobacter stercoris
Pathway
este03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
este00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HNV03_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
este03019
]
HNV03_07270
Enzymes [BR:
este01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HNV03_07270
Messenger RNA biogenesis [BR:
este03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HNV03_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
Flu_PA
DUF1657
Ppx-GppA_III
Motif
Other DBs
NCBI-ProteinID:
QNT14482
UniProt:
A0A9Q6Y6Z2
LinkDB
All DBs
Position
complement(1511519..1512940)
Genome browser
AA seq
473 aa
AA seq
DB search
MKILEAVSNPIFKNVAEVADEINQETYVVGGFVRDYLLNRGQKKDIDFVTVGNGILLAKE
LAKTLENTSPVSVFKRFGTAMFKYKDTDLEFVGARKESYSEDSRKPHVEDGTLEDDQKRR
DFTINTLAISMNKENFGELIDPFNGVEDLNNKIIKTPLEPNITYSDDPLRMMRAIRFATQ
LGFEIEKKSFQAIIDNAERISIVSFERVMDEFQKIMMTDKPSVGLLLLEQSGLMQHILPE
LVALKGIEEVEGQKHKDNFYHTLEVVDNISIHTDNVWLRWAALLHDIGKAVTKRFDKNVG
WTFHSHEFVGSKMVLKLFRRLKLPLGPQVKYVQKLVMMSSRPIAVVTDDATDSALRRLLF
DAGEDFDDLITLCKADITTKNERKQKRFKQNFEVVEQKIKDVEERDRVRNFQPPISGEQI
MEIFDIQPGKEIGILKNAIKEAILEGEVENNYNSALEFVINMGKDLNLEPKNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttagaagccgtatccaatcctatttttaaaaatgtagcagaagttgctgat
gaaattaatcaagaaacttatgttgtaggaggatttgtacgcgattatttgttgaatcgt
ggtcaaaaaaaagacatcgattttgttaccgtaggaaacggaatattattagccaaagag
ttggccaaaacattagaaaacacatcacccgtttcagtttttaaacgatttggaacagca
atgttcaaatacaaagacactgatttagaatttgtaggtgcgcgaaaagagagttattct
gaagatagccgtaaacctcatgtggaagatggtacattagaagatgaccaaaaacgtcgt
gatttcacaattaatacgctggcaatttcaatgaacaaagaaaactttggcgaattgatt
gatccctttaatggagtagaagatttgaataacaaaatcatcaagactccattagaacct
aatattacctattctgatgacccattgcgtatgatgcgtgcaattcgttttgctacacag
ttagggttcgaaatagaaaaaaaatcttttcaggcaataattgataatgctgaacgtatt
agtatcgtgtcttttgagcgtgtgatggatgagtttcagaaaattatgatgacagataaa
ccatctgttggattattgttattggaacaatcaggtttaatgcaacatattttaccagaa
ttggttgcgttaaaaggaattgaagaagtagaaggacaaaaacataaagataatttttac
catacgttagaagtggtagataatatttctatacacaccgacaatgtctggttgcgttgg
gcagctttattgcatgatattggaaaagcagttacaaaacgttttgataagaatgtaggt
tggacatttcattcacacgaatttgttggctctaaaatggtcctaaaattattcagacga
ttaaaattaccattaggaccacaagttaaatatgttcaaaaattggtcatgatgagctct
cgaccaattgcagttgtaacagatgacgcaacagattcagcattgcgcagattattgttt
gatgcaggagaagattttgacgatttaataacgctttgcaaagcagacattacaacaaaa
aatgaacgtaaacaaaaacgttttaaacaaaattttgaagttgtagaacaaaaaattaaa
gatgttgaagaacgcgatagagttcgtaattttcaaccaccaatttctggagagcaaatc
atggaaatatttgatattcagccaggaaaagaaattggaatacttaaaaatgccatcaaa
gaagcaatcttagaaggcgaagtcgaaaataattataattctgccttagaatttgtaatt
aatatgggaaaagatttaaatttggaaccgaaaaatatttag
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